RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 UNC13DQ70J99 1090 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 APTXQ7Z2E3 356 aaKnown RBP13.28□□□□□ -0.28
TRIM40-205ENST00000307859 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 MEIS1O00470 390 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 MED24O75448 989 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 PSMD10O75832 226 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 EHHADHQ08426 723 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 STIM1Q13586 685 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 NCAPH2Q6IBW4 605 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 CATSPERGQ6ZRH7 1159 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 NIPA1Q7RTP0 329 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
TRIM40-205ENST00000307859 CACTINQ8WUQ7 758 aaKnown RBP13.28□□□□□ -0.28
TRIM40-205ENST00000307859 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
TRIM40-205ENST00000307859 WNK4Q96J92 1243 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
TRIM40-205ENST00000307859 UIMC1Q96RL1 719 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 TMOD4Q9NZQ9 345 aa13.28□□□□□ -0.28
TRIM40-205ENST00000307859 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 PSMA7O14818 248 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.29
TRIM40-205ENST00000307859 SPATA31C1P0DKV0 1188 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 BCRP11274 1271 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.29
TRIM40-205ENST00000307859 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
TRIM40-205ENST00000307859 COG2Q14746 738 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 KRT26Q7Z3Y9 468 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 TMC6Q7Z403 805 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 FILIP1Q7Z7B0 1213 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 CATSPER3Q86XQ3 398 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 VSTM4Q8IW00 320 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 LRRC8AQ8IWT6 810 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 KCTD17Q8N5Z5 321 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 KIAA1524Q8TCG1 905 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 DNAJC19Q96DA6 116 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 POLR3CQ9BUI4 534 aaPredicted RBP13.27□□□□□ -0.29
TRIM40-205ENST00000307859 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
TRIM40-205ENST00000307859 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 KIAA1024Q9UPX6 916 aa13.27□□□□□ -0.29
TRIM40-205ENST00000307859 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
TRIM40-205ENST00000307859 DOCK5Q9H7D0 1870 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 SLC10A3P09131 477 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 RPS6P62753 249 aaKnown RBP13.26□□□□□ -0.29
TRIM40-205ENST00000307859 UBXN2AP68543 259 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 LRMPQ12912 555 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 STK4Q13043 487 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 PRKG1Q13976 671 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 HSP90AA4PQ58FG1 418 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 LRCH2Q5VUJ6 765 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 DLK2Q6UY11 383 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 OTOP1Q7RTM1 612 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 C2orf69Q8N8R5 385 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 KIAA0895Q8NCT3 520 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 DDX12PQ92771 950 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 GBA2Q9HCG7 927 aaPredicted RBP13.26□□□□□ -0.29
TRIM40-205ENST00000307859 MAPK8IP1Q9UQF2 711 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 CSADQ9Y600 493 aa13.26□□□□□ -0.29
TRIM40-205ENST00000307859 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 E9PMD0 336 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 EML1O00423 815 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 PLA2G4BP0C869 781 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 FCER1AP12319 257 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
TRIM40-205ENST00000307859 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 SPAG1Q07617 926 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 PSMD2Q13200 908 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 NR1I3Q14994 352 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 TTI2Q6NXR4 508 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 POTEEQ6S8J3 1075 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 SLC30A10Q6XR72 485 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 DYMQ7RTS9 669 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 CDCA5Q96FF9 252 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 CTAGE1Q96RT6 745 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 MAF1Q9H063 256 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 RNF146Q9NTX7 359 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
TRIM40-205ENST00000307859 UBIAD1Q9Y5Z9 338 aa13.25□□□□□ -0.29
TRIM40-205ENST00000307859 TRIM49BA6NDI0 452 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 DLL1O00548 723 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ARP10275 920 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ITGB5P18084 799 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 MUTP22033 750 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms