RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 RSPH14Q9UHP6 348 aa24.34■■□□□ 1.49
TPM4-201ENST00000300933 HERC5Q9UII4 1024 aaKnown RBP24.34■■□□□ 1.49
TPM4-201ENST00000300933 ZNF76P36508 570 aa24.33■■□□□ 1.49
TPM4-201ENST00000300933 PABPC4Q13310 644 aaKnown RBP eCLIP24.33■■□□□ 1.492e-7■■■□□ 18.3
TPM4-201ENST00000300933 GPBP1Q86WP2 473 aa24.33■■□□□ 1.49
TPM4-201ENST00000300933 CATSPER3Q86XQ3 398 aa24.33■■□□□ 1.49
TPM4-201ENST00000300933 NAA15Q9BXJ9 866 aaKnown RBP24.33■■□□□ 1.49
TPM4-201ENST00000300933 RASSF4Q9H2L5 321 aa24.33■■□□□ 1.49
TPM4-201ENST00000300933 ARHGEF10LQ9HCE6 1279 aa24.33■■□□□ 1.49
TPM4-201ENST00000300933 PVALEFA0A1B0GWK0 134 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 MYO1CO00159 1063 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 SF3B2Q13435 895 aaKnown RBP24.33■■□□□ 1.48
TPM4-201ENST00000300933 SPDYE2Q495Y8 402 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 NIM1KQ8IY84 436 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 ETNPPLQ8TBG4 499 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 GOLGA1Q92805 767 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 PSMD1Q99460 953 aa24.33■■□□□ 1.48
TPM4-201ENST00000300933 DNM2P50570 870 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 CRYGNQ8WXF5 182 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 PUF60Q9UHX1 559 aaKnown RBP24.32■■□□□ 1.48
TPM4-201ENST00000300933 ZNRF3Q9ULT6 936 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 ZNF569Q5MCW4 686 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 WDR59Q6PJI9 974 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 CYP26C1Q6V0L0 522 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 RABGGTAQ92696 567 aa24.32■■□□□ 1.48
TPM4-201ENST00000300933 WNT10BO00744 389 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 MSH4O15457 936 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 HERC4Q5GLZ8 1057 aaPredicted RBP24.31■■□□□ 1.48
TPM4-201ENST00000300933 TMTC1Q8IUR5 882 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 OR8K1Q8NGG5 319 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 RGL1Q9NZL6 768 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 TMX2Q9Y320 296 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 EPHB6O15197 1021 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 KRT18P05783 430 aaKnown RBP24.31■■□□□ 1.48
TPM4-201ENST00000300933 SPIRE1Q08AE8 756 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 FAM207AQ9NSI2 230 aaPredicted RBP24.31■■□□□ 1.48
TPM4-201ENST00000300933 VPS18Q9P253 973 aa24.31■■□□□ 1.48
TPM4-201ENST00000300933 CHMP2AO43633 222 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 ARSHQ5FYA8 562 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 GLT8D2Q9H1C3 349 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 CYP3A7-CYP3A51PA0A087WV96 503 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 CYP3A7P24462 503 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 AP3B2Q13367 1082 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 CCDC51Q96ER9 411 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 PDE11AQ9HCR9 933 aa24.3■■□□□ 1.48
TPM4-201ENST00000300933 GOLGA6L9A6NEM1 432 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 CYP11B2P19099 503 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 BAG6P46379 1132 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 FAM26FQ5R3K3 315 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 BTNL9Q6UXG8 535 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 GUF1Q8N442 669 aaKnown RBP24.29■■□□□ 1.48
TPM4-201ENST00000300933 NOC3LQ8WTT2 800 aaKnown RBP24.29■■□□□ 1.48
TPM4-201ENST00000300933 REXO2Q9Y3B8 237 aaKnown RBP24.29■■□□□ 1.48
TPM4-201ENST00000300933 ASTN2O75129 1339 aaPredicted RBP24.29■■□□□ 1.48
TPM4-201ENST00000300933 EML1O00423 815 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 ZBTB39O15060 712 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 SREBF1P36956 1147 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 EHHADHQ08426 723 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 CWC15Q9P013 229 aaKnown RBP24.29■■□□□ 1.48
TPM4-201ENST00000300933 CAPN11Q9UMQ6 739 aa24.29■■□□□ 1.48
TPM4-201ENST00000300933 SPATA31C1P0DKV0 1188 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 MYOCDQ8IZQ8 938 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 GOLGA5Q8TBA6 731 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 NT5C3AQ9H0P0 336 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 BMP2KQ9NSY1 1161 aaPredicted RBP24.28■■□□□ 1.48
TPM4-201ENST00000300933 EPN1Q9Y6I3 576 aaPredicted RBP24.28■■□□□ 1.48
TPM4-201ENST00000300933 A0A1W2PQC6 194 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 TRAF5O00463 557 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 EXOC4Q96A65 974 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 SUGCTQ9HAC7 445 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 GOPCQ9HD26 462 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 CASP5P51878 434 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 TRIM14Q14142 442 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 SLFN12Q8IYM2 578 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 MBOAT7Q96N66 472 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 TANGO6Q9C0B7 1094 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 MMRN2Q9H8L6 949 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 GUCA1BQ9UMX6 200 aa24.28■■□□□ 1.48
TPM4-201ENST00000300933 NDUFA10O95299 355 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 PLEKP08567 350 aaPredicted RBP24.27■■□□□ 1.48
TPM4-201ENST00000300933 CHMP4BP1P59074 171 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 FAM114A1Q8IWE2 563 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 SLC35F6Q8N357 371 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 PIGOQ8TEQ8 1089 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 NDST4Q9H3R1 872 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 SFI1A8K8P3 1242 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 KIF5CO60282 957 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 N4BP1O75113 896 aaKnown RBP24.27■■□□□ 1.48
TPM4-201ENST00000300933 FECHP22830 423 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 CAP2P40123 477 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 LRRC55Q6ZSA7 311 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 SMCR8Q8TEV9 937 aaPredicted RBP24.27■■□□□ 1.48
TPM4-201ENST00000300933 WDR18Q9BV38 432 aa24.27■■□□□ 1.48
TPM4-201ENST00000300933 KDM3AQ9Y4C1 1321 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 CCDC151A5D8V7 595 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 RSPH10B2B2RC85 870 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 RSPH10BP0C881 870 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 ARHGAP25P42331 645 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 CYP27A1Q02318 531 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 APBA1Q02410 837 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms