RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PRR12Q9ULL5 1215 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 LGALS16A8MUM7 142 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 RSPH10B2B2RC85 870 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 GAS7O60861 476 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 RSPH10BP0C881 870 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CLCN6P51797 869 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 COASYQ13057 564 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CCDC181Q5TID7 509 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 FGFBP2Q9BYJ0 223 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CTAGE15A4D2H0 777 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 YDJCA8MPS7 323 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 MED24O75448 989 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CTAGE8P0CG41 777 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CYP2J2P51589 502 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 RRP1BQ14684 758 aaKnown RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 WDR78Q5VTH9 848 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 TTI2Q6NXR4 508 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CTAGE6Q86UF2 777 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 CTAGE4Q8IX94 777 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 HAS1Q92839 578 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 NAPGQ99747 312 aaPredicted RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 DUSP9Q99956 384 aaKnown RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 LSM14BQ9BX40 385 aaKnown RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 NHEJ1Q9H9Q4 299 aaPredicted RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 LIMA1Q9UHB6 759 aaKnown RBP10.3□□□□□ -0.76
PRDM9-201ENST00000296682 FLOT1O75955 427 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 FGFR1OPO95684 399 aaKnown RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 NR2F2P24468 414 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 EEF1GP26641 437 aaKnown RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 KRT86O43790 486 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 EIF2AK2P19525 551 aaKnown RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 MAGEA1P43355 309 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 GYS2P54840 703 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 RASSF7Q02833 373 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 ORC2Q13416 577 aaPredicted RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 LRCH2Q5VUJ6 765 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 UNC13DQ70J99 1090 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 GOLGA1Q92805 767 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 AGBL1Q96MI9 1066 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 TRERF1Q96PN7 1200 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 CCPG1Q9ULG6 757 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 PRPHP41219 470 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 SFR1Q86XK3 245 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
PRDM9-201ENST00000296682 IFIH1Q9BYX4 1025 aaKnown RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
PRDM9-201ENST00000296682 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
PRDM9-201ENST00000296682 FAM86B1E9PN63 330 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 GCOM1H8Y6P7 765 aaPredicted RBP10.28□□□□□ -0.76
PRDM9-201ENST00000296682 CETN3O15182 167 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 FANCGO15287 622 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 FAM86B2P0C5J1 330 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 POLR2MP0CAP2 368 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 EIF4A3P38919 411 aaKnown RBP10.28□□□□□ -0.76
PRDM9-201ENST00000296682 HAUS3Q68CZ6 603 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 FOXR2Q6PJQ5 311 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 ARFGAP3Q9NP61 516 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 EPHB6O15197 1021 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 ZNF185O15231 689 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 USO1O60763 962 aaKnown RBP10.28□□□□□ -0.76
PRDM9-201ENST00000296682 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 PCIF1Q9H4Z3 704 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 SMARCAL1Q9NZC9 954 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 ABCB11O95342 1321 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 PLSCR1O15162 318 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 ACTN1P12814 892 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 KRT83P78385 493 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 RASA3Q14644 834 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 ZC2HC1CQ53FD0 456 aaPredicted RBP10.28□□□□□ -0.76
PRDM9-201ENST00000296682 UTP14CQ5TAP6 766 aaKnown RBP10.28□□□□□ -0.76
PRDM9-201ENST00000296682 KRT222Q8N1A0 295 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 DYDC2Q96IM9 177 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 C7orf25Q9BPX7 421 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 LRRC27Q9C0I9 530 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 LACRTQ9GZZ8 138 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 NT5C3AQ9H0P0 336 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 THAP9Q9H5L6 903 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 SUGCTQ9HAC7 445 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 ITIH6Q6UXX5 1313 aa10.28□□□□□ -0.76
PRDM9-201ENST00000296682 IGKV6D-41A0A0C4DH26 115 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 LRRC53A6NM62 1247 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 MOCS3O95396 460 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 PNMA6AP0CW24 399 aaPredicted RBP10.27□□□□□ -0.76
PRDM9-201ENST00000296682 NMT1P30419 496 aaKnown RBP10.27□□□□□ -0.76
PRDM9-201ENST00000296682 FKBP3Q00688 224 aaKnown RBP10.27□□□□□ -0.76
PRDM9-201ENST00000296682 GFPT1Q06210 699 aaPredicted RBP10.27□□□□□ -0.76
PRDM9-201ENST00000296682 KCNA1Q09470 495 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 KCNB1Q14721 858 aa10.27□□□□□ -0.76
PRDM9-201ENST00000296682 MTMR9Q96QG7 549 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms