RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 GOLGA8IPA6NC78 632 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 GOLGA8JA6NMD2 632 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PDZD4Q76G19 769 aaPredicted RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 NIM1KQ8IY84 436 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 CAPN11Q9UMQ6 739 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 NFU1Q9UMS0 254 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PCDHA5Q9Y5H7 936 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PTK2Q05397 1052 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 ARHGEF18Q6ZSZ5 1173 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 COL4A3BPQ9Y5P4 624 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 MT-ND3P03897 115 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 NSUN2Q08J23 767 aaKnown RBP eCLIP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 UBE2SQ16763 222 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 CCDC92Q53HC0 331 aaPredicted RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 PLAAQ9Y263 795 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 GOLGA8MH3BSY2 632 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 FMNL1O95466 1100 aaPredicted RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 BAG6P46379 1132 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 HNRNPH2P55795 449 aaKnown RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 TSPY1Q01534 308 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 ANKRD35Q8N283 1001 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 PCDHA4Q9UN74 947 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 PI4K2BG5E9Z4 385 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 SPZ1Q9BXG8 430 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 CALN1Q9BXU9 219 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 MYO1FO00160 1098 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 CHRNDQ07001 517 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 THOC5Q13769 683 aaKnown RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 P2RX5Q93086 422 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 SFMBT1Q9UHJ3 866 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 DDAH1O94760 285 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 PRPF38AQ8NAV1 312 aaKnown RBP17.43■□□□□ 0.38
SSRP1-202ENST00000293880 MLXIPLQ9NP71 852 aa17.43■□□□□ 0.38
SSRP1-202ENST00000293880 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 PSMC2P35998 433 aaKnown RBP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 SLMAPQ14BN4 828 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 ANKRD36BP1Q96IX9 119 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 ELAC2Q9BQ52 826 aaKnown RBP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 ZBTB22O15209 634 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 EVI5O60447 810 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 TADA3O75528 432 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 ICA1Q05084 483 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 KIF19Q2TAC6 998 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 KRT80Q6KB66 452 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 RNF207Q6ZRF8 634 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 TRIML1Q8N9V2 468 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 NT5C1BQ96P26 610 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 CLRN2A0PK11 232 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 MCF2LO15068 1137 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 MAN1A2O60476 641 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 HNRNPCP07910 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 DR1Q01658 176 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 ZC3H18Q86VM9 953 aaKnown RBP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 MRPL11Q9Y3B7 192 aaKnown RBP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 A0A0G2JND7 137 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 NR1D1P20393 614 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 TRAIPQ9BWF2 469 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 GDF11O95390 407 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 ZNF658Q5TYW1 1059 aaPredicted RBP17.42■□□□□ 0.38
SSRP1-202ENST00000293880 HACE1Q8IYU2 909 aa17.42■□□□□ 0.38
SSRP1-202ENST00000293880 EXOC1LA0A1B0GW35 172 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 PGRMC1O00264 195 aaKnown RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 LARGE1O95461 756 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 GRAMD1BQ3KR37 738 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 ZNF280CQ8ND82 737 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 ADPGKQ9BRR6 497 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 GFAPP14136 432 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 CYP27A1Q02318 531 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 ACTN3Q08043 901 aaPredicted RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 RGS9BPQ6ZS82 235 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 C7orf31Q8N865 590 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 COA7Q96BR5 231 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 NXF1Q9UBU9 619 aaKnown RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 PHKA1P46020 1223 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 FAM186BQ8IYM0 893 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 TTLL11Q8NHH1 800 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 CHURC1Q8WUH1 139 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 GREM2Q9H772 168 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 HNRNPCL2B2RXH8 293 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 H3BRJ5 948 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 HNRNPCL1O60812 293 aaKnown RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 CCDC159P0C7I6 412 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 TRIM59Q8IWR1 403 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 TXLNGQ9NUQ3 528 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms