RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RBBP6Q7Z6E9 1792 aaKnown RBP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 NPHP3-ACAD11A0A0J9YXS1 232 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 MFAP3LO75121 409 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 SETQ01105 290 aaPredicted RBP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 UBXN1Q04323 297 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 FAM26FQ5R3K3 315 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 LRCH2Q5VUJ6 765 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 MCF2L2Q86YR7 1114 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 FAM114A1Q8IWE2 563 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 CCDC65Q8IXS2 484 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 CPXCR1Q8N123 301 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 KCTD17Q8N5Z5 321 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 MYRIPQ8NFW9 859 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 C12orf42Q96LP6 360 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 HSD17B14Q9BPX1 270 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 PICK1Q9NRD5 415 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 DNM3Q9UQ16 869 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 CASP14P31944 242 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 FXR1P51114 621 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC40-201ENST00000269318 LRRC63Q05C16 580 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 MUM1L1Q5H9M0 696 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 SLC30A10Q6XR72 485 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 MB21D1Q8N884 522 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 EEF2KMTQ96G04 330 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 TUBGCP2Q9BSJ2 902 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 UQCRHLA0A096LP55 91 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 A0A1W2PQC6 194 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 UQCRHP07919 91 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 FDX1P10109 184 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 ARP10275 920 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 ALAS1P13196 640 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 FECHP22830 423 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 CYP4A11Q02928 519 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 PABPC4Q13310 644 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC40-201ENST00000269318 LRRC41Q15345 812 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 ZCWPW2Q504Y3 356 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 B3GNT9Q6UX72 402 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 MYOCDQ8IZQ8 938 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 MXRA8Q9BRK3 442 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 FGFBP2Q9BYJ0 223 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
CCDC40-201ENST00000269318 TUFT1Q9NNX1 390 aa18.5■□□□□ 0.55
CCDC40-201ENST00000269318 MAP3K20Q9NYL2 800 aaKnown RBP18.5■□□□□ 0.55
CCDC40-201ENST00000269318 FRMPD4Q14CM0 1322 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 VWA5AO00534 786 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 ITGB5P18084 799 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 TRIM14Q14142 442 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 CNGA4Q8IV77 575 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 SAMD3Q8N6K7 520 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 SYTL5Q8TDW5 730 aaPredicted RBP18.49■□□□□ 0.55
CCDC40-201ENST00000269318 CPLX3Q8WVH0 158 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 CCDC51Q96ER9 411 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 ZFP91Q96JP5 570 aaPredicted RBP18.49■□□□□ 0.55
CCDC40-201ENST00000269318 RGL1Q9NZL6 768 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
CCDC40-201ENST00000269318 RLFQ13129 1914 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 CCP110O43303 1012 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 SLITRK3O94933 977 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 BCRP11274 1271 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-201ENST00000269318 GIT2Q14161 759 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 MIIPQ5JXC2 388 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 NOL9Q5SY16 702 aaKnown RBP18.48■□□□□ 0.55
CCDC40-201ENST00000269318 LRRC55Q6ZSA7 311 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 REXO1L1PQ8IX06 675 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 IL31RAQ8NI17 732 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 WNK4Q96J92 1243 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 ZNF577Q9BSK1 485 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 NAA15Q9BXJ9 866 aaKnown RBP18.48■□□□□ 0.55
CCDC40-201ENST00000269318 B4DLN1 442 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 RNF225M0QZC1 329 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-201ENST00000269318 NKRFO15226 690 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCDC40-201ENST00000269318 GAS7O60861 476 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 ZBED4O75132 1171 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 EYA4O95677 639 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 DNM2P50570 870 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 KRT26Q7Z3Y9 468 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 REPS2Q8NFH8 660 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 ATG4CQ96DT6 458 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 WDR11Q9BZH6 1224 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 HOMER2Q9NSB8 354 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 PAXBP1Q9Y5B6 917 aa18.48■□□□□ 0.55
CCDC40-201ENST00000269318 C19orf81C9J6K1 198 aa18.47■□□□□ 0.55
CCDC40-201ENST00000269318 KIF2AO00139 706 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-201ENST00000269318 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-201ENST00000269318 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCDC40-201ENST00000269318 HMGCS2P54868 508 aa18.47■□□□□ 0.55
CCDC40-201ENST00000269318 HERC4Q5GLZ8 1057 aaPredicted RBP18.47■□□□□ 0.55
CCDC40-201ENST00000269318 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
CCDC40-201ENST00000269318 REEP2Q9BRK0 252 aa18.47■□□□□ 0.55
CCDC40-201ENST00000269318 UNC45AQ9H3U1 944 aa18.47■□□□□ 0.55
CCDC40-201ENST00000269318 ADAMTS5Q9UNA0 930 aa18.47■□□□□ 0.55
CCDC40-201ENST00000269318 IPO5O00410 1097 aaKnown RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 DDNO94850 711 aaPredicted RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 TPM1P09493 284 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 RPS6P62753 249 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms