RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ARMT1Q9H993 441 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 GIMAP4Q9NUV9 329 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 THEMIS2Q5TEJ8 643 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 GET4Q7L5D6 327 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 LPIN2Q92539 896 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RUBCNQ92622 972 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PNMA2Q9UL42 364 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RBM12BQ8IXT5 1001 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 DRAXINQ8NBI3 349 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 LSG1Q9H089 658 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 ARPP21Q9UBL0 812 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 WDR37Q9Y2I8 494 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SH3GLB1Q9Y371 365 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 CDK12Q9NYV4 1490 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 MYH7BA7E2Y1 1941 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ZNF532Q9HCE3 1301 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 A0A0D9SFI3 127 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 EXOC3O60645 756 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 HSPD1P10809 573 aaKnown RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 GCLCP48506 637 aaPredicted RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 TUBGCP2Q9BSJ2 902 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ZNF277Q9NRM2 450 aaPredicted RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 SERTAD1Q9UHV2 236 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 KCNJ14Q9UNX9 436 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 NSFL1CQ9UNZ2 370 aaKnown RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 FAM186AA6NE01 2351 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 PPP1R37O75864 691 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 FAM107AO95990 144 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 PTCH1Q13635 1447 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ANP32DO95626 131 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ATP4AP20648 1035 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 EEF1DP29692 281 aaKnown RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 SERPINB6P35237 376 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 KPNB1Q14974 876 aaKnown RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 SLC35F6Q8N357 371 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ANKRD42Q8N9B4 389 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 SLC17A8Q8NDX2 589 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 CHAMP1Q96JM3 812 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 GID8Q9NWU2 228 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 FBXO9Q9UK97 447 aaPredicted RBP6.15□□□□□ -1.42
VCAN-201ENST00000265077 ARHGEF9O43307 516 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 APOEP02649 317 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 MYCT1Q8N699 235 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 NGLY1Q96IV0 654 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 TRAPPC9Q96Q05 1148 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 C19orf44Q9H6X5 657 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 GPCPD1Q9NPB8 672 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ZNF521Q96K83 1311 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 IRF6O14896 467 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ACADSP16219 412 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 CUL1Q13616 776 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 ARMC3Q5W041 872 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 C1orf112Q9NSG2 853 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 NDE1Q9NXR1 346 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 PALD1Q9ULE6 856 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 TRAF3IP3Q9Y228 551 aa6.15□□□□□ -1.42
VCAN-201ENST00000265077 PICALMQ13492 652 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 BLIDQ8IZY5 108 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 SUCLG2Q96I99 432 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 FUT8Q9BYC5 575 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 ZNF446Q9NWS9 450 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 NVLO15381 856 aaKnown RBP6.15□□□□□ -1.43
VCAN-201ENST00000265077 KRT14P02533 472 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 HIBADHP31937 336 aaKnown RBP6.15□□□□□ -1.43
VCAN-201ENST00000265077 PTGDRQ13258 359 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 SLC39A14Q15043 492 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 LONP2Q86WA8 852 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 USP44Q9H0E7 712 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 L2HGDHQ9H9P8 463 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 VPS54Q9P1Q0 977 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 BTBD7Q9P203 1132 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 RTCBQ9Y3I0 505 aaKnown RBP6.15□□□□□ -1.43
VCAN-201ENST00000265077 ATP10DQ9P241 1426 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 LSP1P33241 339 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 GUCY1A3Q02108 690 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 NEK8Q86SG6 692 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 FLCNQ8NFG4 579 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 ADCY8P40145 1251 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 GUCY2DQ02846 1103 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 SAMD9LQ8IVG5 1584 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 BLZF1Q9H2G9 400 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 PCDHB13Q9Y5F0 798 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 PGRMC1O00264 195 aaKnown RBP6.15□□□□□ -1.43
VCAN-201ENST00000265077 POLR2BP30876 1174 aaKnown RBP6.15□□□□□ -1.43
VCAN-201ENST00000265077 PTH1RQ03431 593 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 EHHADHQ08426 723 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 NCAPH2Q6IBW4 605 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 TTLL11Q8NHH1 800 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 ZSCAN10Q96SZ4 725 aaPredicted RBP6.15□□□□□ -1.43
VCAN-201ENST00000265077 EPC1Q9H2F5 836 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 VPS37BQ9H9H4 285 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 NLRC4Q9NPP4 1024 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 C2CD2Q9Y426 696 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 DMRT2Q9Y5R5 561 aa6.15□□□□□ -1.43
VCAN-201ENST00000265077 S100A1P23297 94 aa6.14□□□□□ -1.43
VCAN-201ENST00000265077 MRPS25P82663 173 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms