RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TRMT1LQ7Z2T5 733 aaKnown RBP15.1■□□□□ 0.01
VMP1-201ENST00000262291 PIGOQ8TEQ8 1089 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 FEM1BQ9UK73 627 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 FLOT1O75955 427 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 ARP10275 920 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 CYP11B2P19099 503 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 HERC4Q5GLZ8 1057 aaPredicted RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 MB21D1Q8N884 522 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 IL31RAQ8NI17 732 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 PCMTD1Q96MG8 357 aaPredicted RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 NAP1L4Q99733 375 aaKnown RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 IRX2Q9BZI1 471 aaPredicted RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 THAP9Q9H5L6 903 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 SH2D4AQ9H788 454 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 CALCOCO1Q9P1Z2 691 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 VAV3Q9UKW4 847 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 BRCA1P38398 1863 aaKnown RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 ZNF536O15090 1300 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 IGLV3-22A0A075B6J6 115 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 FZD9O00144 591 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 FANCGO15287 622 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 TNFAIP1Q13829 316 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
VMP1-201ENST00000262291 ZNF215Q9UL58 517 aaPredicted RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 MRPL11Q9Y3B7 192 aaKnown RBP15.09■□□□□ 0.01
VMP1-201ENST00000262291 PVALEFA0A1B0GWK0 134 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 SFI1A8K8P3 1242 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 LGALS16A8MUM7 142 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 RSPH10B2B2RC85 870 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 RSPH10BP0C881 870 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 EPS15P42566 896 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0.01
VMP1-201ENST00000262291 FBXO38Q6PIJ6 1188 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 TPH2Q8IWU9 490 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 WRNIP1Q96S55 665 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 MRPL44Q9H9J2 332 aaKnown RBP15.08■□□□□ 0.01
VMP1-201ENST00000262291 LZTFL1Q9NQ48 299 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 CD2APQ9Y5K6 639 aa15.08■□□□□ 0.01
VMP1-201ENST00000262291 BICDL2A1A5D9 508 aa15.08■□□□□ 0
VMP1-201ENST00000262291 TULP2O00295 520 aa15.08■□□□□ 0
VMP1-201ENST00000262291 PIK3CDO00329 1044 aa15.08■□□□□ 0
VMP1-201ENST00000262291 STX10O60499 249 aa15.08■□□□□ 0
VMP1-201ENST00000262291 KRT9P35527 623 aa15.08■□□□□ 0
VMP1-201ENST00000262291 HNRNPH2P55795 449 aaKnown RBP15.08■□□□□ 0
VMP1-201ENST00000262291 MAP3K10Q02779 954 aa15.08■□□□□ 0
VMP1-201ENST00000262291 ELF2Q15723 593 aa15.08■□□□□ 0
VMP1-201ENST00000262291 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
VMP1-201ENST00000262291 FAM160B2Q86V87 743 aa15.08■□□□□ 0
VMP1-201ENST00000262291 ACRBPQ8NEB7 543 aa15.08■□□□□ 0
VMP1-201ENST00000262291 EIF2AK1Q9BQI3 630 aaKnown RBP15.08■□□□□ 0
VMP1-201ENST00000262291 SLF1Q9BQI6 1058 aa15.08■□□□□ 0
VMP1-201ENST00000262291 NOC4LQ9BVI4 516 aaKnown RBP15.08■□□□□ 0
VMP1-201ENST00000262291 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0
VMP1-201ENST00000262291 BHMT2Q9H2M3 363 aa15.08■□□□□ 0
VMP1-201ENST00000262291 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
VMP1-201ENST00000262291 KDM3AQ9Y4C1 1321 aa15.08■□□□□ 0
VMP1-201ENST00000262291 TTC26A0AVF1 554 aa15.08■□□□□ 0
VMP1-201ENST00000262291 CASP5P51878 434 aa15.08■□□□□ 0
VMP1-201ENST00000262291 SLC12A3P55017 1021 aa15.08■□□□□ 0
VMP1-201ENST00000262291 ERVK-24P63145 666 aa15.08■□□□□ 0
VMP1-201ENST00000262291 SYCP1Q15431 976 aa15.08■□□□□ 0
VMP1-201ENST00000262291 LRCH2Q5VUJ6 765 aa15.08■□□□□ 0
VMP1-201ENST00000262291 CCDC155Q8N6L0 562 aa15.08■□□□□ 0
VMP1-201ENST00000262291 LRRN4CLQ8ND94 238 aa15.08■□□□□ 0
VMP1-201ENST00000262291 RPAP3Q9H6T3 665 aaPredicted RBP15.08■□□□□ 0
VMP1-201ENST00000262291 ABL1P00519 1130 aa15.07■□□□□ 0
VMP1-201ENST00000262291 VCAM1P19320 739 aa15.07■□□□□ 0
VMP1-201ENST00000262291 RPS12P25398 132 aaKnown RBP15.07■□□□□ 0
VMP1-201ENST00000262291 EEF1GP26641 437 aaKnown RBP15.07■□□□□ 0
VMP1-201ENST00000262291 CIITAP33076 1130 aa15.07■□□□□ 0
VMP1-201ENST00000262291 TBC1D8BQ0IIM8 1120 aa15.07■□□□□ 0
VMP1-201ENST00000262291 HYIQ5T013 277 aa15.07■□□□□ 0
VMP1-201ENST00000262291 CENPPQ6IPU0 288 aa15.07■□□□□ 0
VMP1-201ENST00000262291 DYDC2Q96IM9 177 aa15.07■□□□□ 0
VMP1-201ENST00000262291 CHP1Q99653 195 aa15.07■□□□□ 0
VMP1-201ENST00000262291 BMP2KQ9NSY1 1161 aaPredicted RBP15.07■□□□□ 0
VMP1-201ENST00000262291 GGA3Q9NZ52 723 aa15.07■□□□□ 0
VMP1-201ENST00000262291 SYNPO2Q9UMS6 1093 aa15.07■□□□□ 0
VMP1-201ENST00000262291 MOXD1Q6UVY6 613 aa15.07■□□□□ 0
VMP1-201ENST00000262291 ZNF507Q8TCN5 953 aa15.07■□□□□ 0
VMP1-201ENST00000262291 PANX2Q96RD6 677 aa15.07■□□□□ 0
VMP1-201ENST00000262291 RUSC1Q9BVN2 902 aa15.07■□□□□ 0
VMP1-201ENST00000262291 IKZF4Q9H2S9 585 aa15.07■□□□□ 0
VMP1-201ENST00000262291 ABHD10Q9NUJ1 306 aa15.07■□□□□ 0
VMP1-201ENST00000262291 AGPAT5Q9NUQ2 364 aa15.07■□□□□ 0
VMP1-201ENST00000262291 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
VMP1-201ENST00000262291 TPM1P09493 284 aa15.06■□□□□ 0
VMP1-201ENST00000262291 SLC20A2Q08357 652 aa15.06■□□□□ 0
VMP1-201ENST00000262291 EHHADHQ08426 723 aa15.06■□□□□ 0
VMP1-201ENST00000262291 MIIPQ5JXC2 388 aa15.06■□□□□ 0
VMP1-201ENST00000262291 HAUS3Q68CZ6 603 aa15.06■□□□□ 0
VMP1-201ENST00000262291 TRIM65Q6PJ69 517 aa15.06■□□□□ 0
VMP1-201ENST00000262291 CCDC125Q86Z20 511 aa15.06■□□□□ 0
VMP1-201ENST00000262291 MYOCDQ8IZQ8 938 aa15.06■□□□□ 0
VMP1-201ENST00000262291 PRPF38AQ8NAV1 312 aaKnown RBP15.06■□□□□ 0
VMP1-201ENST00000262291 ERMNQ8TAM6 284 aa15.06■□□□□ 0
VMP1-201ENST00000262291 FAM20AQ96MK3 541 aa15.06■□□□□ 0
VMP1-201ENST00000262291 REEP2Q9BRK0 252 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms