RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 FAM196AQ6ZSG2 479 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 B4GALNT4Q76KP1 1039 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 HS2ST1Q7LGA3 356 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 TPH2Q8IWU9 490 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 SPICE1Q8N0Z3 855 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 MYCT1Q8N699 235 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 ARFGAP2Q8N6H7 521 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 KIAA0895Q8NCT3 520 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 NT5C3AQ9H0P0 336 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 RIC8AQ9NPQ8 531 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 PSD3Q9NYI0 1048 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 PLAGL2Q9UPG8 496 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 ATRNO75882 1429 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 AFDNP55196 1824 aaKnown RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 GOLGA6L10A0A0M3HER8 536 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 POTEFA5A3E0 1075 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 USP17L10C9JJH3 530 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 DDX39AO00148 427 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 HAX1O00165 279 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 SERPING1P05155 500 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 POTEIP0CG38 1075 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ACTN1P12814 892 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 RPL13P26373 211 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 UBXN2AP68543 259 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 AMPD2Q01433 879 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 GRIK5Q16478 980 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PAPD7Q5XG87 772 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 EMBQ6PCB8 327 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 POTEGQ6S5H5 508 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 POTEEQ6S8J3 1075 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 KIAA0825Q8IV33 1275 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 GUF1Q8N442 669 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 LMBR1Q8WVP7 490 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 RAD54LQ92698 747 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ARL8AQ96BM9 186 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 C7orf25Q9BPX7 421 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 NUDT12Q9BQG2 462 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ZMYND12Q9H0C1 365 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 DDX47Q9H0S4 455 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 NUCKS1Q9H1E3 243 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 CD209Q9NNX6 404 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 FAM53CQ9NYF3 392 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 SERPINB13Q9UIV8 391 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 BCL9O00512 1426 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 TARSL2A2RTX5 802 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 KLRC4O43908 158 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 GFPT2O94808 682 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 CFBP00751 764 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 H2AFZP0C0S5 128 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 AKR1B1P15121 316 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 KLRC1P26715 233 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PRPHP41219 470 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 IRAK1P51617 712 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ALKBH5Q6P6C2 394 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 H2AFVQ71UI9 128 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ZNF384Q8TF68 577 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 LRRC45Q96CN5 670 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 IQCDQ96DY2 449 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 MTMR8Q96EF0 704 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 CABS1Q96KC9 395 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 SCLT1Q96NL6 688 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 LEMD3Q9Y2U8 911 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PVALEFA0A1B0GWK0 134 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 LRRN2O75325 713 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 TTLL1O95922 423 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 NR1D1P20393 614 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 KCNH2Q12809 1159 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PDXDC1Q6P996 788 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 TADA2BQ86TJ2 420 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 SLC51AQ86UW1 340 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 EFCAB13Q8IY85 973 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 OR2W6PQ8NHA6 318 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 NEDD1Q8NHV4 660 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 CCDC26Q8TAB7 109 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ZNF507Q8TCN5 953 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ARHGEF1Q92888 912 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 ERGIC2Q96RQ1 377 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 VIPAS39Q9H9C1 493 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 HDAC9Q9UKV0 1011 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 BCS1LQ9Y276 419 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 UTP11Q9Y3A2 253 aaKnown RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 A0A087WUV0 522 aaPredicted RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 GSTTP1A0A1W2PQM5 241 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PALM3A6NDB9 673 aaPredicted RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 GNA14O95837 355 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 TNFAIP3P21580 790 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 HOXA13P31271 388 aaPredicted RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 STAT1P42224 750 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 CETN1Q12798 172 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 GRB10Q13322 594 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 GRAPQ13588 217 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ASPRV1Q53RT3 343 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 GBP6Q6ZN66 633 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 DDX42Q86XP3 938 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP44-201ENST00000258499 GRAPLQ8TC17 118 aaPredicted RBP5.2□□□□□ -1.58
USP44-201ENST00000258499 ZIM3Q96PE6 472 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 SPZ1Q9BXG8 430 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PACSIN1Q9BY11 444 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 BHMT2Q9H2M3 363 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 CTTNBP2NLQ9P2B4 639 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms