RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 SPDYCQ5MJ68 293 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 SUN5Q8TC36 379 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 DHTKD1Q96HY7 919 aaPredicted RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 DNAJC7Q99615 494 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 BCORQ6W2J9 1755 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 ATXN2Q99700 1313 aaKnown RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 STXBP3O00186 592 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 N4BP3O15049 544 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 HSPA1AP0DMV8 641 aaKnown RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 HSPA1BP0DMV9 641 aaKnown RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 COPB1P53618 953 aaKnown RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 CTAG1AP78358 180 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 CDK17Q00537 523 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 ZNF658Q5TYW1 1059 aaPredicted RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 ARL6IP4Q66PJ3 421 aaKnown RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 LDHAL6AQ6ZMR3 332 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 MMS22LQ6ZRQ5 1243 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 DAAM2Q86T65 1068 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.24
PMPCB-201ENST00000249269 EPN1Q9Y6I3 576 aaPredicted RBP16.52■□□□□ 0.24
PMPCB-201ENST00000249269 USP11P51784 963 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 HDAC4P56524 1084 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 USP4Q13107 963 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 PAK1Q13153 545 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 PUM3Q15397 648 aaKnown RBP16.52■□□□□ 0.23
PMPCB-201ENST00000249269 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.23
PMPCB-201ENST00000249269 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 FAM76AQ8TAV0 307 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 COG1Q8WTW3 980 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 ZNF75CPQ92670 426 aaPredicted RBP16.52■□□□□ 0.23
PMPCB-201ENST00000249269 TSGA10Q9BZW7 698 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 PIH1D3Q9NQM4 214 aaKnown RBP16.52■□□□□ 0.23
PMPCB-201ENST00000249269 KCTD5Q9NXV2 234 aa16.52■□□□□ 0.23
PMPCB-201ENST00000249269 MYH3P11055 1940 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 EME2A4GXA9 379 aaPredicted RBP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 hCG_1984214I3L0E3 225 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 TBC1D12O60347 775 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 NDUFA10O95299 355 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 PRLRP16471 622 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 KRT31Q15323 416 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 TCP11X2Q5H9J9 407 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 ERMNQ8TAM6 284 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 SAR1BQ9Y6B6 198 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 ANKRD36CQ5JPF3 1778 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 A0A087WUV0 522 aaPredicted RBP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 KRT86O43790 486 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 PRPF6O94906 941 aaKnown RBP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 CUEDC1Q9NWM3 386 aaPredicted RBP16.51■□□□□ 0.23
PMPCB-201ENST00000249269 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
PMPCB-201ENST00000249269 RREB1Q92766 1687 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 RAB27AP51159 221 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 MNAT1P51948 309 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 ERVK-24P63145 666 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 PAK2Q13177 524 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 MEA1Q16626 185 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 CAPN11Q9UMQ6 739 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 IDH1O75874 414 aaKnown RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 FGFR2P21802 821 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 CYLC1P35663 651 aaPredicted RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 NFX1Q12986 1120 aaKnown RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 KCNB1Q14721 858 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 KIAA1614Q5VZ46 1190 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 LRRC31Q6UY01 552 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 SDCCAG8Q86SQ7 713 aaPredicted RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 MAGEF1Q9HAY2 307 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
PMPCB-201ENST00000249269 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
PMPCB-201ENST00000249269 EIF3CLB5ME19 914 aaKnown RBP16.49■□□□□ 0.23
PMPCB-201ENST00000249269 RFX1P22670 979 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 CTSWP56202 376 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 GRIN1Q05586 938 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 FIGNQ5HY92 759 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
PMPCB-201ENST00000249269 EZH1Q92800 747 aaPredicted RBP16.49■□□□□ 0.23
PMPCB-201ENST00000249269 EIF3CQ99613 913 aaKnown RBP16.49■□□□□ 0.23
PMPCB-201ENST00000249269 FAM204AQ9H8W3 233 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 HPCAL4Q9UM19 191 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 SQORQ9Y6N5 450 aa16.49■□□□□ 0.23
PMPCB-201ENST00000249269 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms