RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
DDX49-201ENST00000247003 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
DDX49-201ENST00000247003 JDP2Q8WYK2 163 aa16.77■□□□□ 0.28
DDX49-201ENST00000247003 LENG9Q96B70 501 aa16.77■□□□□ 0.28
DDX49-201ENST00000247003 P2RX7Q99572 595 aaKnown RBP16.77■□□□□ 0.28
DDX49-201ENST00000247003 FEZ1Q99689 392 aa16.77■□□□□ 0.28
DDX49-201ENST00000247003 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
DDX49-201ENST00000247003 TRAF5O00463 557 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 MSH4O15457 936 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 SLC12A3P55017 1021 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 MEA1Q16626 185 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 LRRC55Q6ZSA7 311 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 CEP63Q96MT8 703 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 CHP1Q99653 195 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.27
DDX49-201ENST00000247003 TAL1P17542 331 aaPredicted RBP16.76■□□□□ 0.27
DDX49-201ENST00000247003 TGFB2P61812 414 aa16.76■□□□□ 0.27
DDX49-201ENST00000247003 TNFAIP1Q13829 316 aa16.76■□□□□ 0.27
DDX49-201ENST00000247003 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
DDX49-201ENST00000247003 TBC1D7Q9P0N9 293 aa16.76■□□□□ 0.27
DDX49-201ENST00000247003 TADA3O75528 432 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 KLK7P49862 253 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 CXCL9Q07325 125 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 KIAA1328Q86T90 577 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 SYT2Q8N9I0 419 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 POLR3CQ9BUI4 534 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 IRX2Q9BZI1 471 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 TAOK3Q9H2K8 898 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 HAUS4Q9H6D7 363 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 MYOZ2Q9NPC6 264 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 EMILIN3Q9NT22 766 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 AGPAT5Q9NUQ2 364 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 ATAD5Q96QE3 1844 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 FRMD3A2A2Y4 597 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 WNT10BO00744 389 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 TBCAO75347 108 aaKnown RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 RAD51AP2Q09MP3 1159 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.274e-8■■■■■ 37.5
DDX49-201ENST00000247003 TNIP1Q15025 636 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 CEP112Q8N8E3 955 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 NAPGQ99747 312 aaPredicted RBP16.75■□□□□ 0.27
DDX49-201ENST00000247003 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 VAV3Q9UKW4 847 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 RABGAP1Q9Y3P9 1069 aa16.75■□□□□ 0.27
DDX49-201ENST00000247003 NPHP3-ACAD11A0A0J9YXS1 232 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 MEIS1O00470 390 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 KRT86O43790 486 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 EPS15P42566 896 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 CDK17Q00537 523 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 LRCH2Q5VUJ6 765 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 FBXO38Q6PIJ6 1188 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 WDR59Q6PJI9 974 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 NELFCDQ8IXH7 590 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 SLC35F6Q8N357 371 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 LRRN4CLQ8ND94 238 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 NEK11Q8NG66 645 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
DDX49-201ENST00000247003 EIF2AK1Q9BQI3 630 aaKnown RBP16.74■□□□□ 0.27
DDX49-201ENST00000247003 NHEJ1Q9H9Q4 299 aaPredicted RBP16.74■□□□□ 0.27
DDX49-201ENST00000247003 IGLV3-22A0A075B6J6 115 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 A0A0U1RQJ8 604 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 POLD1P28340 1107 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 ATRIPQ8WXE1 791 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
DDX49-201ENST00000247003 GUCA1BQ9UMX6 200 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 SIK3Q9Y2K2 1263 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 PCDHA2Q9Y5H9 948 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
DDX49-201ENST00000247003 SPA17Q15506 151 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 EDRF1Q3B7T1 1238 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 CCDC122Q5T0U0 273 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 CACNA2D4Q7Z3S7 1137 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 CDAN1Q8IWY9 1227 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
DDX49-201ENST00000247003 CCDC42Q96M95 316 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 EIF3CQ99613 913 aaKnown RBP16.73■□□□□ 0.27
DDX49-201ENST00000247003 REEP2Q9BRK0 252 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 ZNF341Q9BYN7 854 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 WDR11Q9BZH6 1224 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 DEF6Q9H4E7 631 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
DDX49-201ENST00000247003 RASSF10A6NK89 507 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 CETN3O15182 167 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 GAS7O60861 476 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 EYA4O95677 639 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms