RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 LOC102724428A0A0B4J2F2 783 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 GFPT2O94808 682 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 PLTPP55058 493 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 SIK1P57059 783 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 PIGSQ96S52 555 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 PHLPP2Q6ZVD8 1323 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 GDF11O95390 407 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 SLC4A1P02730 911 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 MMP1P03956 469 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 PHEXP78562 749 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 ARHGEF18Q6ZSZ5 1173 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 EXOC8Q8IYI6 725 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 HMGB1P1B2RPK0 211 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 GNGT2O14610 69 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ADD2P35612 726 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 IFT88Q13099 833 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 DNAJC24Q6P3W2 148 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 MRPL46Q9H2W6 279 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ABCD1P33897 745 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ARL4AP40617 200 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 THOC5Q13769 683 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 MRPL47Q9HD33 250 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 LARGE1O95461 756 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 SLC12A1Q13621 1099 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 FAF1Q9UNN5 650 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 PRKAB2O43741 272 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 STAT2P52630 851 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 BASP1P80723 227 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ZKSCAN8Q15776 578 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ZBTB33Q86T24 672 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 PARD3BQ8TEW8 1205 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 PBKQ96KB5 322 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 LRFN2Q9ULH4 789 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 FTCDO95954 541 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
LAMA4-201ENST00000230538 ORC6Q9Y5N6 252 aa12.5□□□□□ -0.41
LAMA4-201ENST00000230538 KIF23Q02241 960 aaPredicted RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 Q3C1V9 767 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 NHEJ1Q9H9Q4 299 aaPredicted RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 SAMSN1Q9NSI8 373 aaKnown RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 CPSF3Q9UKF6 684 aaKnown RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 MYL1P05976 194 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 SYDE2Q5VT97 1194 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 FIS1Q9Y3D6 152 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 CLASP1Q7Z460 1538 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 TCP11X2Q5H9J9 407 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 LCORLQ8N3X6 602 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 CXorf38Q8TB03 319 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 PPWD1Q96BP3 646 aaKnown RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 COA7Q96BR5 231 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 THAP9Q9H5L6 903 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 SH2B2O14492 632 aaPredicted RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 GSTA4O15217 222 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 BMP3P12645 472 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 CCHCR1Q8TD31 782 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 TMEM2Q9UHN6 1383 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 SERPING1P05155 500 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 NXF1Q9UBU9 619 aaKnown RBP12.49□□□□□ -0.41
LAMA4-201ENST00000230538 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
LAMA4-201ENST00000230538 NVLO15381 856 aaKnown RBP12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ERFEQ4G0M1 354 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 CFAP74Q9C0B2 1584 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 KIF1BO60333 1816 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 MT-ND3P03897 115 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 SLFN14P0C7P3 912 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 KPNA2P52292 529 aaKnown RBP12.48□□□□□ -0.41
LAMA4-201ENST00000230538 NR5A1Q13285 461 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 TTC1Q99614 292 aa12.48□□□□□ -0.41
LAMA4-201ENST00000230538 ZFYVE16Q7Z3T8 1539 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms