RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 ZNF844Q08AG5 666 aa17■□□□□ 0.31
VTN-201ENST00000226218 CUL1Q13616 776 aa17■□□□□ 0.31
VTN-201ENST00000226218 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
VTN-201ENST00000226218 C12orf60Q5U649 245 aa17■□□□□ 0.31
VTN-201ENST00000226218 TEX2Q8IWB9 1127 aa17■□□□□ 0.31
VTN-201ENST00000226218 GLIS3Q8NEA6 775 aa17■□□□□ 0.31
VTN-201ENST00000226218 LUC7LQ9NQ29 371 aaKnown RBP17■□□□□ 0.31
VTN-201ENST00000226218 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
VTN-201ENST00000226218 A0A087X0T9 212 aa17■□□□□ 0.31
VTN-201ENST00000226218 GMNCA6NCL1 334 aa17■□□□□ 0.31
VTN-201ENST00000226218 FAM228BP0C875 321 aa17■□□□□ 0.31
VTN-201ENST00000226218 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
VTN-201ENST00000226218 TBC1D5Q92609 795 aa17■□□□□ 0.31
VTN-201ENST00000226218 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
VTN-201ENST00000226218 PACSIN1Q9BY11 444 aa17■□□□□ 0.31
VTN-201ENST00000226218 NEUROG2Q9H2A3 272 aa17■□□□□ 0.31
VTN-201ENST00000226218 BSDC1Q9NW68 430 aaPredicted RBP17■□□□□ 0.31
VTN-201ENST00000226218 MINPP1Q9UNW1 487 aa17■□□□□ 0.31
VTN-201ENST00000226218 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
VTN-201ENST00000226218 MYZAPP0CAP1 466 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 PSEN1P49768 467 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 PSMD2Q13200 908 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 BIRC3Q13489 604 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 QPCTQ16769 361 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 AGBL2Q5U5Z8 902 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 DYMQ7RTS9 669 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 PPANQ9NQ55 473 aaKnown RBP16.99■□□□□ 0.31
VTN-201ENST00000226218 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 DONSONQ9NYP3 566 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 AIPL1Q9NZN9 384 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 COL4A3BPQ9Y5P4 624 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 USP17L3A6NCW0 530 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 USP17L4A6NCW7 530 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 PRDX5P30044 214 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 HPDP32754 393 aaPredicted RBP16.99■□□□□ 0.31
VTN-201ENST00000226218 DNA2P51530 1060 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 MARSP56192 900 aaKnown RBP16.99■□□□□ 0.31
VTN-201ENST00000226218 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 USP17L1Q7RTZ2 530 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 ACTRT1Q8TDG2 376 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 RAD54LQ92698 747 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 TSG101Q99816 390 aa16.99■□□□□ 0.31
VTN-201ENST00000226218 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
VTN-201ENST00000226218 CNOT8Q9UFF9 292 aaKnown RBP16.99■□□□□ 0.31
VTN-201ENST00000226218 NIP7Q9Y221 180 aaKnown RBP eCLIP16.99■□□□□ 0.312e-7■■■■□ 21
VTN-201ENST00000226218 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 GOLGA6L10A6NI86 522 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 DNM1LO00429 736 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 EDIL3O43854 480 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 ERCC3P19447 782 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 KLRK1P26718 216 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 NAPAP54920 295 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 POLR2FP61218 127 aaKnown RBP16.98■□□□□ 0.31
VTN-201ENST00000226218 TMEM119Q4V9L6 283 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 LACTB2Q53H82 288 aaPredicted RBP16.98■□□□□ 0.31
VTN-201ENST00000226218 ANKRD20A8PQ5CZ79 823 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 FAM228AQ86W67 206 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 KLHL7Q8IXQ5 586 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 FUKQ8N0W3 1084 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 OR2W6PQ8NHA6 318 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 TBCKQ8TEA7 893 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 LRRC45Q96CN5 670 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 DYNLL2Q96FJ2 89 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
VTN-201ENST00000226218 TMEM47Q9BQJ4 181 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 CCDC87Q9NVE4 849 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
VTN-201ENST00000226218 SMCO2A6NFE2 343 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 KIF4AO95239 1232 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 USP11P51784 963 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 NEDD9Q14511 834 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 LRRC41Q15345 812 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
VTN-201ENST00000226218 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 CCDC121Q6ZUS5 278 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 TRIM59Q8IWR1 403 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 PBKQ96KB5 322 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 GANQ9H2C0 597 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 C6orf50Q9HD87 102 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 RNASE9P60153 205 aaKnown RBP16.97■□□□□ 0.31
VTN-201ENST00000226218 PPP2R2AP63151 447 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 FKBP3Q00688 224 aaKnown RBP16.97■□□□□ 0.31
VTN-201ENST00000226218 KCNK18Q7Z418 384 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 LRRC57Q8N9N7 239 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 DDX12PQ92771 950 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 DNAJC19Q96DA6 116 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 LEMD3Q9Y2U8 911 aa16.97■□□□□ 0.31
VTN-201ENST00000226218 GNA11P29992 359 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 TXKP42681 527 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 HLTFQ14527 1009 aaKnown RBP eCLIP16.96■□□□□ 0.31
VTN-201ENST00000226218 RPS6KA1Q15418 735 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 DPY19L2P1Q6NXN4 242 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 RUFY4Q6ZNE9 571 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.31
VTN-201ENST00000226218 MYOCDQ8IZQ8 938 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 SEC14L1Q92503 715 aa16.96■□□□□ 0.31
VTN-201ENST00000226218 TATDN2Q93075 761 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms