RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SLFN12LQ6IEE8 588 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 KLC3Q6P597 504 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 RBM41Q96IZ5 413 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 TTC1Q99614 292 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TRIM56Q9BRZ2 755 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 BAG5Q9UL15 447 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 VWDEQ8N2E2 1590 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PYGBP11216 843 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 SPARCL1Q14515 664 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 KCNB1Q14721 858 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 ICE2Q659A1 982 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 C17orf53Q8N3J3 647 aaPredicted RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 MRFAP1Q9Y605 127 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 GFAPP14136 432 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TMOD1P28289 359 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 MSH2P43246 934 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 POLR2FP61218 127 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 KYAT1Q16773 422 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 KLHL38Q2WGJ6 581 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TRMT44Q8IYL2 757 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 BLZF1Q9H2G9 400 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 STOML1Q9UBI4 398 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PYCARDQ9ULZ3 195 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 NSFL1CQ9UNZ2 370 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 STK38LQ9Y2H1 464 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PCDHA5Q9Y5H7 936 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 FAM208AQ9UK61 1670 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 CDHR2Q9BYE9 1310 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 FAM187AA6NFU0 413 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CALB1P05937 261 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PTPREP23469 700 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 USP14P54578 494 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 RASSF7Q02833 373 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 LRMPQ12912 555 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 RASA3Q14644 834 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 UNC13DQ70J99 1090 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TRIM31Q9BZY9 425 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PALD1Q9ULE6 856 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 SH3BP5O60239 455 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 KRT10P13645 584 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CHRNA3P32297 505 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 SERPINB4P48594 390 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 SNRPFP62306 86 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 ADPGKQ9BRR6 497 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PARVGQ9HBI0 331 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 KCND2Q9NZV8 630 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 ANAPC5Q9UJX4 755 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 HEG1Q9ULI3 1381 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 S100BP04271 92 aaPredicted RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 TECP42680 631 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 EHHADHQ08426 723 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PPP2R5DQ14738 602 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 FBXO38Q6PIJ6 1188 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 FBXO11Q86XK2 927 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PI4K2BQ8TCG2 481 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 DCAF4Q8WV16 495 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 RNF34Q969K3 372 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 FAM212AQ96EL1 285 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 ANKRD36BP1Q96IX9 119 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 WNT8AQ9H1J5 351 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 EPB41L5Q9HCM4 733 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CYP26B1Q9NR63 512 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 GNPATO15228 680 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 SERPINB6P35237 376 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 LIG3P49916 1009 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 YARSP54577 528 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 TAF12Q16514 161 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 RCSD1Q6JBY9 416 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 C11orf57Q6ZUT1 292 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 TPH2Q8IWU9 490 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 PLIN2Q99541 437 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MAPK8IP1Q9UQF2 711 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 LMO7Q8WWI1 1683 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MROH1Q8NDA8 1641 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 PVALEFA0A1B0GWK0 134 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 PPARGP37231 505 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 JAK3P52333 1124 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 STX1BP61266 288 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 RPS8P62241 208 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 SATB1Q01826 763 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ARHGEF16Q5VV41 709 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 CC2D1AQ6P1N0 951 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 TRIM62Q9BVG3 475 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 TRPV6Q9H1D0 765 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 TBC1D7Q9P0N9 293 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 HESX1Q9UBX0 185 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 FAF1Q9UNN5 650 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 THRAP3Q9Y2W1 955 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 PNMA6FA0A0J9YX94 578 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 M0R2C6 588 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 KIAA0391O15091 583 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 KRT37O76014 449 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 LDHAP00338 332 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 MAPK4P31152 587 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ATP1A2P50993 1020 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 DHX9Q08211 1270 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 TBCCQ15814 346 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 KRT24Q2M2I5 525 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MAGOHBQ96A72 148 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms