RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 RRAGBQ5VZM2 374 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 ZNF513Q8N8E2 541 aaPredicted RBP16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 B4GALNT2Q8NHY0 566 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 OSBPL1AQ9BXW6 950 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 LMCD1Q9NZU5 365 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 DLEC1Q9Y238 1755 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 B4DLN1 442 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 ADAMTS3O15072 1205 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 ORC4O43929 436 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 MOCS3O95396 460 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 VEGFAP15692 232 aaPredicted RBP16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 XBP1P17861 261 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 NPY5RQ15761 445 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 HOMEZQ8IX15 550 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 CCDC197Q8NCU1 140 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
TMEM38A-201ENST00000187762 A0A1W2PQC6 194 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 PAK1Q13153 545 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 EPAS1Q99814 870 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 ZNHIT6Q9NWK9 470 aaKnown RBP16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 LGALS16A8MUM7 142 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 SMIM24O75264 130 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 UPP2O95045 317 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 CYP2D6P10635 497 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 BIRC3Q13489 604 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 UBE4AQ14139 1066 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 CCDC24Q8N4L8 307 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 OR2W6PQ8NHA6 318 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 CHCHD3Q9NX63 227 aaKnown RBP16.29■□□□□ 0.2
TMEM38A-201ENST00000187762 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 ZNF263O14978 683 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 NCK2O43639 380 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 CCND1P24385 295 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 ODF2Q5BJF6 829 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 MTHFD1LQ6UB35 978 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 NELFBQ8WX92 580 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 H0YGN5 161 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 USO1O60763 962 aaKnown RBP16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 SPATA21Q7Z572 469 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 GALNT15Q8N3T1 639 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 NFS1Q9Y697 457 aa16.28■□□□□ 0.2
TMEM38A-201ENST00000187762 NUTM2BA6NNL0 878 aaPredicted RBP16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 NUTM2EB1AL46 878 aaPredicted RBP16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 STXBP3O00186 592 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 PARP1P09874 1014 aaKnown RBP16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 MECOMQ03112 1051 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 TRADDQ15628 312 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 TTC38Q5R3I4 469 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 ANKRD20A2Q5SQ80 823 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 ANKRD20A1Q5TYW2 823 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 ANKRD20A3Q5VUR7 823 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 KRT26Q7Z3Y9 468 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 ZNF507Q8TCN5 953 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 MS4A14Q96JA4 679 aa16.27■□□□□ 0.2
TMEM38A-201ENST00000187762 DPPA5A6NC42 116 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 EIF4E1BA6NMX2 242 aaKnown RBP16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 HSD17B3P37058 310 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 RANBP1P43487 201 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 ZNF844Q08AG5 666 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 PTGDRQ13258 359 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 PDIA5Q14554 519 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 SPA17Q15506 151 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 ERICH1Q86X53 443 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 ZFAND2BQ8WV99 257 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 CHMP6Q96FZ7 201 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 BLZF1Q9H2G9 400 aa16.27■□□□□ 0.19
TMEM38A-201ENST00000187762 COL5A3P25940 1745 aaPredicted RBP16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 RNF8O76064 485 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 PYGBP11216 843 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 NQO1P15559 274 aaKnown RBP16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 PIK3AP1Q6ZUJ8 805 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 IRF2BP1Q8IU81 584 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 ANKS4BQ8N8V4 417 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 COL22A1Q8NFW1 1626 aaPredicted RBP16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 PPFIA2O75334 1257 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 PRDX5P30044 214 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 SF3B3Q15393 1217 aaKnown RBP16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 CFAP221Q4G0U5 840 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 AGBL2Q5U5Z8 902 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 RUFY4Q6ZNE9 571 aa16.26■□□□□ 0.19
TMEM38A-201ENST00000187762 ARHGAP22Q7Z5H3 698 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms