RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 FBXO38Q6PIJ6 1188 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 CCDC170Q8IYT3 715 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 KCTD17Q8N5Z5 321 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 GOLGA1Q92805 767 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 LENG9Q96B70 501 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 CHP1Q99653 195 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 NAPGQ99747 312 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 PDGFDQ9GZP0 370 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 HAUS4Q9H6D7 363 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 FEM1BQ9UK73 627 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 OPLAHO14841 1288 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 MSH4O15457 936 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 KRT86O43790 486 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 PLA2G6O60733 806 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 TBCAO75347 108 aaKnown RBP9.15□□□□□ -0.94
VAMP3-201ENST00000054666 CAP2P40123 477 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 EPS15P42566 896 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 KLK7P49862 253 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 SLC12A3P55017 1021 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 PABPC4Q13310 644 aaKnown RBP eCLIP9.15□□□□□ -0.942e-8■■■■□ 19.9
VAMP3-201ENST00000054666 TNFAIP1Q13829 316 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 CIAPIN1Q6FI81 312 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 SAMD1Q6SPF0 538 aaPredicted RBP9.15□□□□□ -0.94
VAMP3-201ENST00000054666 CATSPER3Q86XQ3 398 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 SLC35F6Q8N357 371 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 CEP112Q8N8E3 955 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 LRRN4CLQ8ND94 238 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 JDP2Q8WYK2 163 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 P2RX7Q99572 595 aaKnown RBP9.15□□□□□ -0.94
VAMP3-201ENST00000054666 MMRN2Q9H8L6 949 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 TBC1D7Q9P0N9 293 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 PIM2Q9P1W9 311 aa9.15□□□□□ -0.94
VAMP3-201ENST00000054666 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 CDK17Q00537 523 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 SETQ01105 290 aaPredicted RBP9.15□□□□□ -0.95
VAMP3-201ENST00000054666 CACNB1Q02641 598 aaPredicted RBP9.15□□□□□ -0.95
VAMP3-201ENST00000054666 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 SPA17Q15506 151 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 ZCWPW2Q504Y3 356 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 TEX35Q5T0J7 233 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 MIGA2Q7L4E1 593 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 NELFCDQ8IXH7 590 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 SYT2Q8N9I0 419 aaPredicted RBP9.15□□□□□ -0.95
VAMP3-201ENST00000054666 GLIS3Q8NEA6 775 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 NEK11Q8NG66 645 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 TAOK3Q9H2K8 898 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 DEF6Q9H4E7 631 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.95
VAMP3-201ENST00000054666 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.95
VAMP3-201ENST00000054666 VAV3Q9UKW4 847 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 GUCA1BQ9UMX6 200 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.95
VAMP3-201ENST00000054666 NPHP3-ACAD11A0A0J9YXS1 232 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 A0A0U1RQJ8 604 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 MEIS1O00470 390 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 KCNA3P22001 575 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 ARHGAP25P42331 645 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 CYP4A11Q02928 519 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 KIAA1755Q5JYT7 1200 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 CCDC122Q5T0U0 273 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 LRCH2Q5VUJ6 765 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 WDR59Q6PJI9 974 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 CACNA2D4Q7Z3S7 1137 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 DEFB132Q7Z7B7 95 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 ATRIPQ8WXE1 791 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 JAKMIP2Q96AA8 810 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 CCDC42Q96M95 316 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 POLR3CQ9BUI4 534 aaPredicted RBP9.14□□□□□ -0.95
VAMP3-201ENST00000054666 TSGA10Q9BZW7 698 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 NHEJ1Q9H9Q4 299 aaPredicted RBP9.14□□□□□ -0.95
VAMP3-201ENST00000054666 CDC23Q9UJX2 597 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 SIK3Q9Y2K2 1263 aa9.14□□□□□ -0.95
VAMP3-201ENST00000054666 EIF3CLB5ME19 914 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 WNT10BO00744 389 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 CETN3O15182 167 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 GAS7O60861 476 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 SPATA31C1P0DKV0 1188 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 H2AFXP16104 143 aaPredicted RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 CHMP4BP1P59074 171 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 TGFB2P61812 414 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 CXCL9Q07325 125 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 TNIP1Q15025 636 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 EDRF1Q3B7T1 1238 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 TXLNBQ8N3L3 684 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 GPR161Q8N6U8 529 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 SCFD1Q8WVM8 642 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 EIF3CQ99613 913 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 EIF2AK1Q9BQI3 630 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 REEP2Q9BRK0 252 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 TUFT1Q9NNX1 390 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 OGFRQ9NZT2 677 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 FAM184BQ9ULE4 1060 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 ATAD5Q96QE3 1844 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms