RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Bzw1Q9CQC6 419 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Acsl3Q9CZW4 720 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lrriq4A6H6A4 596 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Fam129cD3YZB0 591 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Chil3O35744 398 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Prl2c2P04095 224 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Chmp6P0C0A3 200 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Tcp1P11983 556 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Eef2P58252 858 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Slc8a1P70414 970 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rnf207Q3V3A7 635 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Myo19Q5SV80 963 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Trpc6Q61143 930 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Naa15Q80UM3 865 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ccdc172Q810N9 267 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 RadxQ8C779 850 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 HibchQ8QZS1 385 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Tmem134Q8R0J4 195 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Pspc1Q8R326 523 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ulk4Q3V129 1303 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lama4P97927 1816 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Pfkfb3A7UAK5 555 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Abcb4P21440 1276 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lzts1P60853 599 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 ChukQ60680 745 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Krt40Q6IFX3 439 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Sde2Q8K1J5 448 aaKnown RBP13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 E2f4Q8R0K9 410 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rev1Q920Q2 1249 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Noc2lQ9WV70 747 aaKnown RBP13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Mrc1Q61830 1456 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 CluhQ5SW19 1315 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lilrb4Q64281 335 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Iffo1Q8BXL9 562 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ccser1Q8C0C4 895 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Mmgt1Q8K273 131 aaKnown RBP13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 1700020D05RikQ99PB1 294 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Arl2bpQ9D385 163 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rabl3Q9D4V7 236 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Q9D5Q8 446 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 LrmdaQ9D9B4 229 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Tfap4Q9JIZ5 338 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Unc13bQ9Z1N9 1602 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ccdc138Q0VF22 680 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Trim43aQ3TL54 445 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Cracr2aQ3UP38 310 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 GmncQ3URY2 333 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Sh3gl1Q62419 368 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Trub2Q91WG3 331 aaKnown RBP13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Usp11Q99K46 921 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Dph5Q9CWQ0 281 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Prl2c5Q9JLV9 222 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Gm28036V9GXJ1 658 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 MetP16056 1379 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ssc5dQ8BV57 1371 aa13.12□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Serpinb6eI7HJI3 429 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 RelaQ04207 549 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lrrc36Q3V0M2 755 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Adck2Q6NSR3 617 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Prr18Q6PAN7 307 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Trim37Q6PCX9 961 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 SugctQ7TNE1 436 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Usp20Q8C6M1 916 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Mcur1Q9CXD6 340 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Snrnp35Q9D384 244 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Nsmce1Q9D720 266 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Myh7Q91Z83 1935 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Tnks1bp1P58871 1720 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Nfxl1E9Q8I7 918 aaKnown RBP13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 VrtnQ3SYK4 740 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Pls1Q3V0K9 630 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ppp2r2aQ6P1F6 447 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Klhl29Q80T74 875 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Camsap3Q80VC9 1252 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lmbrd1Q8K0B2 537 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 IntS13Q8QZV7 732 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ero1aQ8R180 464 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 1700109H08RikQ9D9C0 210 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 4931408C20RikE9PWP9 1381 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Tnnc1P19123 161 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rps8P62242 208 aaKnown RBP13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Atp1b3P97370 278 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Micall1Q8BGT6 870 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ttc22Q8C159 568 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Igf2bp3Q9CPN8 579 aaKnown RBP13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Dnajc7Q9QYI3 494 aa13.11□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Map7d1A2AJI0 846 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ube4aE9Q735 1028 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 CflarO35732 481 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Eno1P17182 434 aaKnown RBP13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Klra9Q2TJJ8 266 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rbbp5Q8BX09 538 aaKnown RBP13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Senp2Q91ZX6 588 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ranbp17Q99NF8 1088 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rsrc1Q9DBU6 334 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Klra10Q9R1G6 266 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Gnat1P20612 350 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Alppl2P24823 529 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Nhej1Q3KNJ2 295 aa13.1□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Plekha7Q3UIL6 1118 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms