RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 DgkiD3YWQ0 1071 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Gad1P48318 593 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 PtgdrP70263 357 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 HmmrQ00547 794 aaKnown RBP18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Pnma5Q5DTT8 618 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Stxbp3Q60770 592 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Trpc6Q61143 930 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Scnn1aQ61180 699 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Krt74Q6IFZ9 495 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 NfrkbQ6PIJ4 1296 aaKnown RBP18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Haus4Q8BFT2 363 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Thap3Q8BJ25 218 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Lrrc57Q9D1G5 239 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Trim10Q9WUH5 489 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Pitpnm2Q6ZPQ6 1335 aa18.09■□□□□ 0.49
Shh-201ENSMUST00000002708 Ncapg2Q6DFV1 1138 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Ccdc189Q6NZQ0 333 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 GopcQ8BH60 463 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Ift74Q8BKE9 600 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Mboat7Q8CHK3 473 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 LgsnQ8CIX8 563 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Rab3il1Q8VDV3 383 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Creb3l3Q91XE9 479 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 1700020D05RikQ99PB1 294 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Cmtr1Q9DBC3 837 aa18.08■□□□□ 0.49
Shh-201ENSMUST00000002708 Snap25P60879 206 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Slc2a13Q3UHK1 637 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Olfr832Q7TRG9 312 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Yipf1Q91VU1 306 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Hnrnph3D3Z3N4 346 aaKnown RBP18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Trim43aQ3TL54 445 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Nell2Q61220 819 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Cdk17Q8K0D0 523 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Znrd1-asQ8R0E5 213 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Ifih1Q8R5F7 1025 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Lztr1Q9CQ33 837 aa18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Ddx47Q9CWX9 455 aaKnown RBP18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Ascc1Q9D8Z1 356 aaKnown RBP18.08■□□□□ 0.48
Shh-201ENSMUST00000002708 Prdm11A2AGX3 565 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Ccdc157Q5SPX1 718 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Baiap3Q80TT2 1134 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Lgi2Q8K4Z0 550 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Trap1Q9CQN1 706 aaKnown RBP18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Mkrn1Q9QXP6 481 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Col5a2Q3U962 1497 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 KhsrpQ3U0V1 748 aaKnown RBP18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Ddx3xQ62167 662 aaKnown RBP18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Atp2b4Q6Q477 1205 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 Def6Q8C2K1 630 aa18.07■□□□□ 0.48
Shh-201ENSMUST00000002708 P4hbP09103 509 aaKnown RBP18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 PltpP55065 493 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Sh3gl2Q62420 352 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Rexo1Q7TT28 1213 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Armcx3Q8BHS6 379 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Atxn7Q8R4I1 867 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Eef1gQ9D8N0 437 aaKnown RBP18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Slc12a7Q9WVL3 1083 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Lbhd1A0A087WPA0 259 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Tcp1P11983 556 aaKnown RBP18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Stat3P42227 770 aaKnown RBP18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 HelqQ2VPA6 1069 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Rnf207Q3V3A7 635 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Pim2Q62070 370 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Rufy1Q8BIJ7 712 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Klhl7Q8BUL5 586 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Dennd2aQ8C4S8 1000 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Spata2Q8K004 515 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Vwa5aQ99KC8 793 aaKnown RBP18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 4930550L24RikQ99PA7 320 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Myh14Q6URW6 2000 aa18.06■□□□□ 0.48
Shh-201ENSMUST00000002708 Plxnb2B2RXS4 1842 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Spocd1B1ASB6 936 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Cyp2e1Q05421 493 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Fam107bQ3TGF2 131 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Qrich1Q3UA37 777 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Fam183bQ5NC57 135 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Akap4Q60662 849 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Armc6Q8BNU0 468 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Ddx19bQ8BZY3 494 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Csgalnact2Q8C1F4 542 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 NapaQ9DB05 295 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Pcif1P59114 706 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Rnpc3Q3UZ01 514 aaKnown RBP18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 CrkQ64010 304 aa18.05■□□□□ 0.48
Shh-201ENSMUST00000002708 Tbc1d9bQ5SVR0 1263 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 WaplQ65Z40 1200 aaKnown RBP18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Actn1Q7TPR4 892 aaKnown RBP18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Ublcp1Q8BGR9 318 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 SpidrQ8BGX7 933 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Tbx18Q9EPZ6 613 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Cyp2ab1S4R196 498 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Magea10A2AMW4 325 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Rfpl4bJ3QPR6 266 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Gna15P30678 374 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Pstpip1P97814 415 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Acsbg2Q2XU92 667 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Nlrp2Q4PLS0 1046 aaKnown RBP18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Specc1Q5SXY1 1067 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Fermt3Q8K1B8 665 aa18.04■□□□□ 0.48
Shh-201ENSMUST00000002708 Haus2Q9CQS9 234 aa18.04■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms