RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 TRIM22Q8IYM9 498 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 ANKS1AQ92625 1134 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 RANBP17Q9H2T7 1088 aaKnown RBP13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 PRDM12Q9H4Q4 367 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 Q9Y3F1 56 aa13.64□□□□□ -0.23
ERGIC3-220ENST00000640748 FIBPO43427 364 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 SLC16A2P36021 539 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 TRIM29Q14134 588 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 BTNL9Q6UXG8 535 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 FBXO18Q8NFZ0 1043 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 PHKBQ93100 1093 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 AP5M1Q9H0R1 490 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 KAT14Q9H8E8 782 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
ERGIC3-220ENST00000640748 NFIBO00712 420 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 CCL23P55773 120 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 GUCY1B3Q02153 619 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 BAATQ14032 418 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 ATL3Q6DD88 541 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 CTCFLQ8NI51 663 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 ZNF396Q96N95 335 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 GZF1Q9H116 711 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 NKX2-4Q9H2Z4 354 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 VTA1Q9NP79 307 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
ERGIC3-220ENST00000640748 REV3LO60673 3130 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 DEXIO95424 95 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 FGBP02675 491 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 UBE2HP62256 183 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 TROAPQ12815 778 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 CCDC96Q2M329 555 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 DUSP28Q4G0W2 176 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 OTOP2Q7RTS6 562 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 SYMPKQ92797 1274 aaKnown RBP13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 RNF26Q9BY78 433 aaPredicted RBP13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 SEZ6LQ9BYH1 1024 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 CFAP45Q9UL16 551 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 MYO9BQ13459 2157 aa13.61□□□□□ -0.23
ERGIC3-220ENST00000640748 RBM47A0AV96 593 aaKnown RBP13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 ZEB2O60315 1214 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 KIF5BP33176 963 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 ALDH5A1P51649 535 aaPredicted RBP13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 RABGGTBP53611 331 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 RAB30Q15771 203 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 SYDE2Q5VT97 1194 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 KRT40Q6A162 431 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 SLC30A10Q6XR72 485 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 SCLYQ96I15 445 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 GAS2L1Q99501 681 aaPredicted RBP13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 TRMT13Q9NUP7 481 aaKnown RBP13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 MSRAQ9UJ68 235 aa13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
ERGIC3-220ENST00000640748 PRPF3O43395 683 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 GADD45BO75293 160 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 PDHBP11177 359 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 CYP2C9P11712 490 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 MYOGP15173 224 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 GNAQP50148 359 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 TMTC3Q6ZXV5 915 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 PNMA1Q8ND90 353 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 SYAP1Q96A49 352 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 WDR11Q9BZH6 1224 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 TFIP11Q9UBB9 837 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-220ENST00000640748 LOC102724159A0A0B4J2E5 919 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 XBP1P17861 261 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 EDNRBP24530 442 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 GNL2Q13823 731 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 GRM4Q14833 912 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 PWP2Q15269 919 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms