RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 TRPV6Q9H1D0 765 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 EHMT1Q9H9B1 1298 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 ZSWIM6Q9HCJ5 1215 aa20.34■□□□□ 0.85
PTPN11-207ENST00000639857 hCG_1642624A0A1W2PR95 340 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 GGPS1O95749 300 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 F2P00734 622 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 CDC27P30260 824 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 NEDD9Q14511 834 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 GPKOWQ92917 476 aaPredicted RBP eCLIP20.33■□□□□ 0.85
PTPN11-207ENST00000639857 CDHR1Q96JP9 859 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 SENP7Q9BQF6 1050 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 PPP1R12CQ9BZL4 782 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
PTPN11-207ENST00000639857 NAP1L2Q9ULW6 460 aaPredicted RBP20.33■□□□□ 0.85
PTPN11-207ENST00000639857 V9GY48 417 aaPredicted RBP20.33■□□□□ 0.85
PTPN11-207ENST00000639857 SPATA31C2B4DYI2 1134 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 EPHB4P54760 987 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 NAPAP54920 295 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 FAM47CQ5HY64 1035 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 PSRC1Q6PGN9 363 aaPredicted RBP20.32■□□□□ 0.84
PTPN11-207ENST00000639857 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 NLRX1Q86UT6 975 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 GIMAP8Q8ND71 665 aaPredicted RBP20.32■□□□□ 0.84
PTPN11-207ENST00000639857 KAT2BQ92831 832 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 GPRASP2Q96D09 838 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 RNPC3Q96LT9 517 aaKnown RBP20.32■□□□□ 0.84
PTPN11-207ENST00000639857 SPATA33Q96N06 139 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 RIC8AQ9NPQ8 531 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 TRMT13Q9NUP7 481 aaKnown RBP20.32■□□□□ 0.84
PTPN11-207ENST00000639857 CYP46A1Q9Y6A2 500 aa20.32■□□□□ 0.84
PTPN11-207ENST00000639857 LAMA2P24043 3122 aaKnown RBP20.31■□□□□ 0.84
PTPN11-207ENST00000639857 STXBP3O00186 592 aa20.31■□□□□ 0.84
PTPN11-207ENST00000639857 PITPNM1O00562 1244 aa20.31■□□□□ 0.84
PTPN11-207ENST00000639857 FOSP01100 380 aaPredicted RBP20.31■□□□□ 0.84
PTPN11-207ENST00000639857 ADCY7P51828 1080 aa20.31■□□□□ 0.84
PTPN11-207ENST00000639857 SP2Q02086 613 aa20.31■□□□□ 0.84
PTPN11-207ENST00000639857 PFKFB3Q16875 520 aaPredicted RBP20.31■□□□□ 0.84
PTPN11-207ENST00000639857 FAM109BQ6ICB4 259 aaPredicted RBP20.31■□□□□ 0.84
PTPN11-207ENST00000639857 MLXIPQ9HAP2 919 aa20.31■□□□□ 0.84
PTPN11-207ENST00000639857 TRIP12Q14669 1992 aaPredicted RBP20.3■□□□□ 0.84
PTPN11-207ENST00000639857 ESYT2A0FGR8 921 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 HAS3O00219 553 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 PFKMP08237 780 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 CSF2RAP15509 400 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 CYP2C18P33260 490 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 SMAD3P84022 425 aaKnown RBP20.3■□□□□ 0.84
PTPN11-207ENST00000639857 AP3B2Q13367 1082 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 UBE2SQ16763 222 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 HSDL1Q3SXM5 330 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 TYW1BQ6NUM6 668 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 CCDC12Q8WUD4 166 aaPredicted RBP20.3■□□□□ 0.84
PTPN11-207ENST00000639857 IL23AQ9NPF7 189 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 PCDHA6Q9UN73 950 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 PCDHA8Q9Y5H6 950 aa20.3■□□□□ 0.84
PTPN11-207ENST00000639857 MAFGO15525 162 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 SCG2P13521 617 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
PTPN11-207ENST00000639857 SEMA3FQ13275 785 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 MFSD10Q14728 455 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 MCTP2Q6DN12 878 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 CCDC155Q8N6L0 562 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
PTPN11-207ENST00000639857 WNT8AQ9H1J5 351 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 RTEL1Q9NZ71 1219 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 GTF2IRD1Q9UHL9 959 aa20.29■□□□□ 0.84
PTPN11-207ENST00000639857 SCN5AQ14524 2016 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 NOP56O00567 594 aaKnown RBP20.28■□□□□ 0.84
PTPN11-207ENST00000639857 PRPF3O43395 683 aaKnown RBP20.28■□□□□ 0.84
PTPN11-207ENST00000639857 PSEN2P49810 448 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 ANAPC15P60006 121 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 BFSP2Q13515 415 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 TMEM240Q5SV17 173 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 RPUSD2Q8IZ73 545 aaKnown RBP20.28■□□□□ 0.84
PTPN11-207ENST00000639857 C7orf31Q8N865 590 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 CAGE1Q8TC20 777 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■□□□□ 8.5
PTPN11-207ENST00000639857 MTIF3Q9H2K0 278 aaKnown RBP20.28■□□□□ 0.84
PTPN11-207ENST00000639857 NOD1Q9Y239 953 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 UBIAD1Q9Y5Z9 338 aa20.28■□□□□ 0.84
PTPN11-207ENST00000639857 UMODL1Q5DID0 1318 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 KAT6AQ92794 2004 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 SMCO2A6NFE2 343 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 ZNF286BP0CG31 522 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 CYP2C9P11712 490 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 IFNAR1P17181 557 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 PDIA3P30101 505 aaKnown RBP20.27■□□□□ 0.84
PTPN11-207ENST00000639857 RFC2P35250 354 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 CLK2P49760 499 aaKnown RBP20.27■□□□□ 0.84
PTPN11-207ENST00000639857 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
PTPN11-207ENST00000639857 RBL2Q08999 1139 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 TOB2Q14106 344 aaPredicted RBP20.27■□□□□ 0.84
PTPN11-207ENST00000639857 PTGISQ16647 500 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 KIAA0753Q2KHM9 967 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 RASIP1Q5U651 963 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 C16orf59Q7L2K0 433 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 ZNF274Q96GC6 653 aaPredicted RBP20.27■□□□□ 0.84
PTPN11-207ENST00000639857 ZFP91Q96JP5 570 aaPredicted RBP20.27■□□□□ 0.84
PTPN11-207ENST00000639857 C16orf70Q9BSU1 422 aa20.27■□□□□ 0.84
PTPN11-207ENST00000639857 TMEM265A0A087WTH1 108 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 ITGB5P18084 799 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms