RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 SEZ6Q53EL9 994 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 C19orf54Q5BKX5 351 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 MRM1Q6IN84 353 aaKnown RBP0.68□□□□□ -2.3
CCDC7-215ENST00000639629 RELL1Q8IUW5 271 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 TXNDC5Q8NBS9 432 aaKnown RBP0.68□□□□□ -2.3
CCDC7-215ENST00000639629 NOX5Q96PH1 765 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 TMEM209Q96SK2 561 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 MPHOSPH9Q99550 1183 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 TIMP4Q99727 224 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 WNT8AQ9H1J5 351 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 NSUN3Q9H649 340 aaKnown RBP0.68□□□□□ -2.3
CCDC7-215ENST00000639629 IGFLR1Q9H665 355 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 SYNPO2LQ9H987 977 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 AP4E1Q9UPM8 1137 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 CHST2Q9Y4C5 530 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 PCDHB12Q9Y5F1 795 aa0.68□□□□□ -2.3
CCDC7-215ENST00000639629 WDR27A2RRH5 827 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 KLRG2A4D1S0 409 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 DLX3O60479 287 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 TACR2P21452 398 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ITGA1P56199 1179 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 LBX2Q6XYB7 198 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 TMPRSS6Q8IU80 811 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 NLGN1Q8N2Q7 840 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 FAM13CQ8NE31 585 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 BVESQ8NE79 360 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 NKD1Q969G9 470 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SLC6A18Q96N87 628 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ZDHHC5Q9C0B5 715 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ARHGEF4Q9NR80 690 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 DTLQ9NZJ0 730 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 PCLOQ9Y6V0 5065 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SPATA31D1Q6ZQQ2 1576 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 MPOP05164 745 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 L1CAMP32004 1257 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 BMPR1AP36894 532 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 GPR85P60893 370 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 RASGRF1Q13972 1273 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 PDE3AQ14432 1141 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 RASA3Q14644 834 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 AGBL4Q5VU57 503 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SPTY2D1Q68D10 685 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 C16orf59Q7L2K0 433 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ADGRE4PQ86SQ3 457 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 C9orf106Q8NAJ2 232 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 FZD8Q9H461 694 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ANO2Q9NQ90 1003 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 GPRC5BQ9NZH0 403 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 CGGBP1Q9UFW8 167 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 PRKAG3Q9UGI9 489 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 TMEFF2Q9UIK5 374 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 MROH6A6NGR9 719 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 FOXN1O15353 648 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 PMLP29590 882 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SARSP49591 514 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SELENOPP49908 381 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 AFF3P51826 1226 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 HTRA4P83105 476 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 TAGLNQ01995 201 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SNW1Q13573 536 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 FBXL6Q8N531 539 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 IGFBPL1Q8WX77 278 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SYTL4Q96C24 671 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 LPXNO60711 386 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 C1QL1O75973 258 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 CCDC85BQ15834 202 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 DCAF17Q5H9S7 520 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 IGFL4Q6B9Z1 124 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ZC3H14Q6PJT7 736 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 TEPPQ6URK8 271 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 MCF2L2Q86YR7 1114 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 LYSMD2Q8IV50 215 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ZC3H7AQ8IWR0 971 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SCUBE1Q8IWY4 988 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ELMO3Q96BJ8 720 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 CDK5RAP1Q96SZ6 601 aaKnown RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 FOXB1Q99853 325 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 ANTXR1Q9H6X2 564 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 SLAMF8Q9P0V8 285 aa0.67□□□□□ -2.3
CCDC7-215ENST00000639629 GPR55Q9Y2T6 319 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-215ENST00000639629 GOLGA6L22H0YM25 854 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 TRAF5O00463 557 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 AOAHP28039 575 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 FXR1P51114 621 aaKnown RBP eCLIP0.66□□□□□ -2.3
CCDC7-215ENST00000639629 PRR5P85299 388 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 ATP2B2Q01814 1243 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 LRRC32Q14392 662 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 KIR3DS1Q14943 382 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 CNKSR3Q6P9H4 555 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 HS2ST1Q7LGA3 356 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 MAMDC2Q7Z304 686 aaPredicted RBP0.66□□□□□ -2.3
CCDC7-215ENST00000639629 PLEKHH3Q7Z736 793 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 KIAA0825Q8IV33 1275 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 FAM169BQ8N8A8 192 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 GOLM1Q8NBJ4 401 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 ZNF398Q8TD17 642 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 CLEC4DQ8WXI8 215 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 TMEM79Q9BSE2 394 aa0.66□□□□□ -2.3
CCDC7-215ENST00000639629 BTBD2Q9BX70 525 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms