RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CALN1Q9BXU9 219 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 SART1O43290 800 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 ADD1P35611 737 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 CFAP221Q4G0U5 840 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 SYCE1Q8N0S2 351 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 GREM2Q9H772 168 aa18.42■□□□□ 0.54
CACNA1A-253ENST00000637927 H0YC42 278 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 LBRQ14739 615 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 GLE1Q53GS7 698 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 KRT80Q6KB66 452 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 SH3KBP1Q96B97 665 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 INHBAP08476 426 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 PSMC5P62195 406 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 ABCB5Q2M3G0 1257 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 INTS4Q96HW7 963 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 XPO4Q9C0E2 1151 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 DARS2Q6PI48 645 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 ZC4H2Q9NQZ6 224 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 PYGLP06737 847 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 TSC1Q92574 1164 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 ERFP50548 548 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 GNGT1P63211 74 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 MRPS25P82663 173 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 RASIP1Q5U651 963 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 LRCH2Q5VUJ6 765 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 TRPC7Q9HCX4 862 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 MKL2Q9ULH7 1088 aa18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-253ENST00000637927 CREB3O43889 395 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 E2F5Q15329 346 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 FAM178BQ8IXR5 827 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SCYL3Q8IZE3 742 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 MYOCDQ8IZQ8 938 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 MTERF2Q49AM1 385 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SYCP2LQ5T4T6 812 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PNMA1Q8ND90 353 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 HMGXB3Q12766 1538 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SBNO1A3KN83 1393 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 GOLGA8IPA6NC78 632 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 GOLGA8JA6NMD2 632 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PFKFB1P16118 471 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 STX1BP61266 288 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 LRRC41Q15345 812 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 ANGPT1Q15389 498 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 RBBP7Q16576 425 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 HEXIM2Q96MH2 286 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 LLPHQ9BRT6 129 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 CPP00450 1065 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PPP1R2P41236 205 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PSMC1P62191 440 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 DSTYKQ6XUX3 929 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 ANKRD36BP1Q96IX9 119 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PTK2BQ14289 1009 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PUS3Q9BZE2 481 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SGSM2O43147 1006 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 UPP2O95045 317 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 PTPREP23469 700 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 STAT1P42224 750 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 ZNF394Q53GI3 561 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 MLKLQ8NB16 471 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 MAML1Q92585 1016 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SLAIN2Q9P270 581 aa18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-253ENST00000637927 MFSD4BQ5TF39 518 aa18.39■□□□□ 0.54
CACNA1A-253ENST00000637927 LVRNQ6Q4G3 990 aa18.39■□□□□ 0.54
CACNA1A-253ENST00000637927 AGR3Q8TD06 166 aa18.39■□□□□ 0.54
CACNA1A-253ENST00000637927 A0A087WWV3 80 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 GOLGA8MH3BSY2 632 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 LRRC8CQ8TDW0 803 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 MRPL11Q9Y3B7 192 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 NDUFB5O43674 189 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 OCRLQ01968 901 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 TSC22D1Q15714 1073 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 LZTS2Q9BRK4 669 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 SLC8A2Q9UPR5 921 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 ART3Q13508 389 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 SLMAPQ14BN4 828 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 KDM2BQ8NHM5 1336 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 RNF139Q8WU17 664 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 CSRNP1Q96S65 589 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 CCDC90BQ9GZT6 254 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 CCDC159P0C7I6 412 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 ALKBH2Q6NS38 261 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 DACH2Q96NX9 599 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 KIAA1024Q9UPX6 916 aa18.39■□□□□ 0.53
CACNA1A-253ENST00000637927 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 SETSIPP0DME0 302 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 HDLBPQ00341 1268 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 SMYD3Q9H7B4 428 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 TSPOAP1O95153 1857 aa18.38■□□□□ 0.53
CACNA1A-253ENST00000637927 hCG_2014768A0A024R1R8 64 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms