RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GREM2Q9H772 168 aa19.34■□□□□ 0.69
CACNA1A-227ENST00000636549 UBE2TQ9NPD8 197 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-227ENST00000636549 NME3Q13232 169 aa19.34■□□□□ 0.69
CACNA1A-227ENST00000636549 LBRQ14739 615 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-227ENST00000636549 NT5C3AQ9H0P0 336 aa19.34■□□□□ 0.69
CACNA1A-227ENST00000636549 RAB17Q9H0T7 212 aa19.34■□□□□ 0.69
CACNA1A-227ENST00000636549 IREB2P48200 963 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 RPSAP08865 295 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 RFWD2Q8NHY2 731 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 CDKL2Q92772 493 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 ABHD8Q96I13 439 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 USP26Q9BXU7 913 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 CCDC38Q502W7 563 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 B4GALNT4Q76KP1 1039 aa19.33■□□□□ 0.69
CACNA1A-227ENST00000636549 GOLGA8MH3BSY2 632 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 CCDC138Q96M89 665 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 RNF181Q9P0P0 153 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 IBTKQ9P2D0 1353 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 URB2Q14146 1524 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 ASMTLO95671 621 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 RECQLP46063 649 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 EHHADHQ08426 723 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 ZC3H12BQ5HYM0 836 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 GRK7Q8WTQ7 553 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 SLC7A3Q8WY07 619 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 SYTL2Q9HCH5 934 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 ZNF215Q9UL58 517 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 RBBP7Q16576 425 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 IFT43Q96FT9 208 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 EDEM3Q9BZQ6 932 aa19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 ARMCX3Q9UH62 379 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-227ENST00000636549 CCDC195A0A1B0GUA6 201 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 FAM196BA6NMK8 535 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 SART1O43290 800 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 ANP32DO95626 131 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 CLTAP09496 248 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 OAS2P29728 719 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 UBE3AQ05086 875 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 LRRC8CQ8TDW0 803 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 RAPGEF5Q92565 580 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 TTC1Q99614 292 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 ZSCAN32Q9NX65 697 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 CYP2D7A0A087X1C5 515 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 SUPT20HL1Q3ZLR7 823 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 SYCP2LQ5T4T6 812 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 TWF2Q6IBS0 349 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 SERPINB2P05120 415 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 ADD1P35611 737 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 THEMIS2Q5TEJ8 643 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 THNSL1Q8IYQ7 743 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 SIX5Q8N196 739 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 ZNF804BA4D1E1 1349 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 PTK2BQ14289 1009 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 NEK8Q86SG6 692 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 FAM186BQ8IYM0 893 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 TAGAPQ8N103 731 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 LZTS2Q9BRK4 669 aa19.32■□□□□ 0.68
CACNA1A-227ENST00000636549 MAP3K7O43318 606 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 GFPT2O94808 682 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 PTK2Q05397 1052 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 RNF40O75150 1001 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 SYMPKQ92797 1274 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 TMEM106CQ9BVX2 250 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 ATP8B3O60423 1300 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 OR52Z1P0C646 297 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 HSPD1P10809 573 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 MRPS25P82663 173 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 PDXDC2PQ6P474 469 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 C11orf96Q7Z7L8 435 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 ZNF496Q96IT1 587 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 RPF1Q9H9Y2 349 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 NFKBIL1Q9UBC1 381 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 TRPM2O94759 1503 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 SUPT3HB4E1H0 165 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 SOX11P35716 441 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 GNGT1P63211 74 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 DAB2P98082 770 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 VMP1Q96GC9 406 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 CEP19Q96LK0 163 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 HMBSP08397 361 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 CDC25AP30304 524 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 CYP27A1Q02318 531 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 PPP6R3Q5H9R7 873 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 C10orf76Q5T2E6 689 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 GRAMD1CQ8IYS0 662 aa19.31■□□□□ 0.68
CACNA1A-227ENST00000636549 ARL4AP40617 200 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 DRP2Q13474 957 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 TRAIPQ9BWF2 469 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 XPOTO43592 962 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 PEX19P40855 299 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 CLIC4Q9Y696 253 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 STAT2P52630 851 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms