RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 POTEEQ6S8J3 1075 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 ZFP91Q96JP5 570 aaPredicted RBP21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 MRPL11Q9Y3B7 192 aaKnown RBP21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 ITIH6Q6UXX5 1313 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 BICDL2A1A5D9 508 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 PLA2G4BP0C869 781 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 FXR1P51114 621 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 CATSPER3Q86XQ3 398 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 WDR18Q9BV38 432 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 LRRC27Q9C0I9 530 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 NPHP3-ACAD11A0A0J9YXS1 232 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 STX10O60499 249 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 EEF1GP26641 437 aaKnown RBP21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 UBXN1Q04323 297 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 LRRC41Q15345 812 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 PRAMEF18Q5VWM3 479 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 TSC1Q92574 1164 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 FAM20AQ96MK3 541 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 VAV3Q9UKW4 847 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 ZNF536O15090 1300 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 NKRFO15226 690 aaKnown RBP eCLIP21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 PPP1R2P41236 205 aa21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 CACNB1Q02641 598 aaPredicted RBP21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 GTPBP4Q9BZE4 634 aaKnown RBP21.91■■□□□ 1.1
CHRNA4-209ENST00000627000 RNF225M0QZC1 329 aaPredicted RBP21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 MEIS1O00470 390 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 MFAP3LO75121 409 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 SPATA31C1P0DKV0 1188 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 PSMC6P62333 389 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 COASYQ13057 564 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 CENPPQ6IPU0 288 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 NOC3LQ8WTT2 800 aaKnown RBP21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 MAGEC2Q9UBF1 373 aaPredicted RBP21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 FZD1Q9UP38 647 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 ABCB11O95342 1321 aa21.9■■□□□ 1.1
CHRNA4-209ENST00000627000 CTNND1O60716 968 aaKnown RBP21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 RAD51AP2Q09MP3 1159 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 HAUS3Q68CZ6 603 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 TOGARAM2Q6ZUX3 1019 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 GPBP1Q86WP2 473 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 REXO1L1PQ8IX06 675 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 CNOT6LQ96LI5 555 aaKnown RBP21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 PANX2Q96RD6 677 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 KIAA1683Q9H0B3 1180 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 CCPG1Q9ULG6 757 aa21.89■■□□□ 1.1
CHRNA4-209ENST00000627000 LGALS16A8MUM7 142 aa21.89■■□□□ 1.09
CHRNA4-209ENST00000627000 PES1O00541 588 aaKnown RBP21.89■■□□□ 1.09
CHRNA4-209ENST00000627000 WDR46O15213 610 aaKnown RBP21.89■■□□□ 1.09
CHRNA4-209ENST00000627000 MTF1Q14872 753 aa21.89■■□□□ 1.09
CHRNA4-209ENST00000627000 FGFBP2Q9BYJ0 223 aa21.89■■□□□ 1.09
CHRNA4-209ENST00000627000 PANK4Q9NVE7 773 aa21.89■■□□□ 1.09
CHRNA4-209ENST00000627000 SOWAHDA6NJG2 315 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 EML1O00423 815 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 CYP11B2P19099 503 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 GUF1Q8N442 669 aaKnown RBP21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 MB21D1Q8N884 522 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 ZNF507Q8TCN5 953 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 HOOK2Q96ED9 719 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 SLF1Q9BQI6 1058 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 TUBGCP2Q9BSJ2 902 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 TBC1D7Q9P0N9 293 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 ICAM1P05362 532 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 RPA1P27694 616 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 GTF2F1P35269 517 aaKnown RBP eCLIP21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 SLC12A3P55017 1021 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 CYP4A11Q02928 519 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 MTMR2Q13614 643 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 ANGEL2Q5VTE6 544 aaKnown RBP21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 CPXCR1Q8N123 301 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 PRPF38AQ8NAV1 312 aaKnown RBP21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 ERMNQ8TAM6 284 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 TRPM4Q8TD43 1214 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 PPP2R2CQ9Y2T4 447 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 PAXBP1Q9Y5B6 917 aa21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.88■■□□□ 1.09
CHRNA4-209ENST00000627000 B4DLN1 442 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 SLC26A4O43511 780 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 PSMD2Q13200 908 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 ARSHQ5FYA8 562 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 LPAR1Q92633 364 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 DESI2Q9BSY9 194 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 BMP2KQ9NSY1 1161 aaPredicted RBP21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 NFIBO00712 420 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 DYNC1I1O14576 645 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 PABPC4Q13310 644 aaKnown RBP eCLIP21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 TANGO6Q9C0B7 1094 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 PDCL3Q9H2J4 239 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 EMILIN3Q9NT22 766 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 RGL1Q9NZL6 768 aa21.87■■□□□ 1.09
CHRNA4-209ENST00000627000 DOCK1Q14185 1865 aa21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 FAM26FQ5R3K3 315 aa21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 RAD9BQ6WBX8 426 aa21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 TEX2Q8IWB9 1127 aa21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 ZKSCAN4Q969J2 545 aaPredicted RBP21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 RAVER2Q9HCJ3 691 aaKnown RBP21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 COL20A1Q9P218 1284 aa21.86■■□□□ 1.09
CHRNA4-209ENST00000627000 VCAM1P19320 739 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 SYT10Q6XYQ8 523 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 CNGA4Q8IV77 575 aa21.85■■□□□ 1.09
CHRNA4-209ENST00000627000 CLEC4DQ8WXI8 215 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms