RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 ITGB3BPQ13352 177 aaPredicted RBP14.37□□□□□ -0.11
CHD1L-210ENST00000622533 CRYMQ14894 314 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 ALS2CR12Q96Q35 445 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 TRIM9Q9C026 710 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 LOC102724428A0A0B4J2F2 783 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 RGL2O15211 777 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 NKRFO15226 690 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 VEGFAP15692 232 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 TMOD1P28289 359 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 GBP2P32456 591 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 CCNHP51946 323 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 SIK1P57059 783 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 TFAP4Q01664 338 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 INF2Q27J81 1249 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 OR2W6PQ8NHA6 318 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 IFIH1Q9BYX4 1025 aaKnown RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 ANKRD2Q9GZV1 360 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 TMEM60Q9H2L4 133 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 CASZ1Q86V15 1759 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 ZNF335Q9H4Z2 1342 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 OR52Z1P0C646 297 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 TCP1P17987 556 aaKnown RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 PLCG1P19174 1290 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 HIBADHP31937 336 aaKnown RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 ASIC1P78348 528 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-210ENST00000622533 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 MCM9Q9NXL9 1143 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 MAD2L2Q9UI95 211 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 PLAGL2Q9UPG8 496 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 HYOU1Q9Y4L1 999 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 PCDHA13Q9Y5I0 950 aa14.36□□□□□ -0.11
CHD1L-210ENST00000622533 BUB1O43683 1085 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ANKRD20A8PQ5CZ79 823 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ANKRD40Q6AI12 368 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 EGFL6Q8IUX8 553 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 IFT20Q8IY31 132 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 PLAAQ9Y263 795 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 PP2D1A8MPX8 630 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 STXBP3O00186 592 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ADAMTS3O15072 1205 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 RTN2O75298 545 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 BIRC2Q13490 618 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 MIIPQ5JXC2 388 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ARHGAP27Q6ZUM4 889 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 CALML4Q96GE6 196 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 PLIN2Q99541 437 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 BCCIPQ9P287 314 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHD1L-210ENST00000622533 FLT1P17948 1338 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ROBO3Q96MS0 1386 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 WNK3Q9BYP7 1800 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 TMCO5BA8MYB1 307 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 LCA5LO95447 670 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 CYP2D6P10635 497 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 GNA11P29992 359 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ERFEQ4G0M1 354 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 C12orf60Q5U649 245 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 TLDC1Q6P9B6 456 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 CASKIN2Q8WXE0 1202 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 ZNF287Q9HBT7 754 aa14.35□□□□□ -0.11
CHD1L-210ENST00000622533 SCTRP47872 440 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 NONOQ15233 471 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHD1L-210ENST00000622533 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 ZMYND12Q9H0C1 365 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 ACTR5Q9H9F9 607 aaPredicted RBP14.34□□□□□ -0.11
CHD1L-210ENST00000622533 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 TSKSQ9UJT2 592 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 GMNCA6NCL1 334 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 PAK2Q13177 524 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 FMNL3Q8IVF7 1028 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 STAG2Q8N3U4 1231 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 KRT12Q99456 494 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 C6orf50Q9HD87 102 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 GDF3Q9NR23 364 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
CHD1L-210ENST00000622533 CCDC88AQ3V6T2 1871 aa14.33□□□□□ -0.11
CHD1L-210ENST00000622533 CDC25CP30307 473 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 TXNRD1Q16881 649 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 VWA3BQ502W6 1294 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 SLC10A5Q5PT55 438 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 CENPPQ6IPU0 288 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 FOXR2Q6PJQ5 311 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 TMC4Q7Z404 712 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
CHD1L-210ENST00000622533 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-210ENST00000622533 SEC16BQ96JE7 1060 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 SPZ1Q9BXG8 430 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 TLR10Q9BXR5 811 aa14.33□□□□□ -0.12
CHD1L-210ENST00000622533 LRRC27Q9C0I9 530 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms