RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	TCRBV5S4A2T	A0A5A2	114 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	CDC25A	P30304	524 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	MRPS25	P82663	173 aa	Known RBP	12.7	□□□□□ -0.38
TP53-222	ENST00000617185	ZBED6	P86452	979 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	BIRC3	Q13489	604 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	TSR1	Q2NL82	804 aa	Known RBP	12.7	□□□□□ -0.38
TP53-222	ENST00000617185	KANK3	Q6NY19	840 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	LRIG3	Q6UXM1	1119 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	TFCP2L1	Q9NZI6	479 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	NFU1	Q9UMS0	254 aa		12.7	□□□□□ -0.38
TP53-222	ENST00000617185	ANKRD36C	Q5JPF3	1778 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	SPDYE5	A6NIY4	337 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	CPLX1	O14810	134 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	ORC4	O43929	436 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	FAM153B	P0C7A2	387 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	NQO1	P15559	274 aa	Known RBP	12.69	□□□□□ -0.38
TP53-222	ENST00000617185	DRD4	P21917	467 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	SCNN1B	P51168	640 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	EVX2	Q03828	476 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	FAM153C	Q494X1	144 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	CACNA2D4	Q7Z3S7	1137 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	ERICH1	Q86X53	443 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	CNBD1	Q8NA66	436 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	WHAMM	Q8TF30	809 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	STRBP	Q96SI9	672 aa	Known RBP	12.69	□□□□□ -0.38
TP53-222	ENST00000617185	GDF3	Q9NR23	364 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	FAM153A	Q9UHL3	310 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	USP21	Q9UK80	565 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	HPS5	Q9UPZ3	1129 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	PLAA	Q9Y263	795 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	UPP2	O95045	317 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	TMOD1	P28289	359 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	PAFAH1B1	P43034	410 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	GNAQ	P50148	359 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	PPARA	Q07869	468 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	MAF1	Q9H063	256 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	NAPB	Q9H115	298 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	RMI1	Q9H9A7	625 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	PCMTD2	Q9NV79	361 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	TFR2	Q9UP52	801 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	ABCC12	Q96J65	1359 aa		12.69	□□□□□ -0.38
TP53-222	ENST00000617185	CYP2D7	A0A087X1C5	515 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	PHF20L1	A8MW92	1017 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	MINDY4B	A8MYZ0	360 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	OAT	P04181	439 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	MYBL1	P10243	752 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	TCP1	P17987	556 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	CCT6A	P40227	531 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	CARS	P49589	748 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	STX17	P56962	302 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	PPP2R2A	P63151	447 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	MYBPC3	Q14896	1274 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	TTF1	Q15361	905 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	ODF2	Q5BJF6	829 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	ANO7	Q6IWH7	933 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	KLHL10	Q6JEL2	608 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	BARGIN	Q6ZT62	677 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	VPS37D	Q86XT2	251 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	PURB	Q96QR8	312 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	MAP3K14	Q99558	947 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	TMEM165	Q9HC07	324 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	UTRN	P46939	3433 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	UQCRFS1P1	P0C7P4	283 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	ALDH1B1	P30837	517 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	CYLC1	P35663	651 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	ITIH4	Q14624	930 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	PARP10	Q53GL7	1025 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	RUFY4	Q6ZNE9	571 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	IFNL3	Q8IZI9	196 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	KRI1	Q8N9T8	703 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	SPATA20	Q8TB22	786 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	MAIP1	Q8WWC4	291 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	CHMP6	Q96FZ7	201 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	FAM163A	Q96GL9	167 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	ZWILCH	Q9H900	591 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	SERTAD1	Q9UHV2	236 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	PHF24	Q9UPV7	400 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	SLC4A4	Q9Y6R1	1079 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	NRAP	Q86VF7	1730 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	LRRC10B	A6NIK2	292 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185		F8W031	263 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	BACH1	O14867	736 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	CUL4B	Q13620	913 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	TRIM68	Q6AZZ1	485 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	SPICE1	Q8N0Z3	855 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	IFT81	Q8WYA0	676 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	GPR101	Q96P66	508 aa	Predicted RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	UBE2O	Q9C0C9	1292 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	IQCG	Q9H095	443 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	PLCB1	Q9NQ66	1216 aa		12.68	□□□□□ -0.38
TP53-222	ENST00000617185	LIMA1	Q9UHB6	759 aa	Known RBP	12.68	□□□□□ -0.38
TP53-222	ENST00000617185	EIF4E1B	A6NMX2	242 aa	Known RBP	12.67	□□□□□ -0.38
TP53-222	ENST00000617185	POLR2D	O15514	142 aa	Known RBP	12.67	□□□□□ -0.38
TP53-222	ENST00000617185	PRDM1	O75626	825 aa		12.67	□□□□□ -0.38
TP53-222	ENST00000617185	ALDH5A1	P51649	535 aa	Predicted RBP	12.67	□□□□□ -0.38
TP53-222	ENST00000617185	GUCY2F	P51841	1108 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms