RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ZNF280CQ8ND82 737 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 CLMNQ96JQ2 1002 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 TRERF1Q96PN7 1200 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 PYM1Q9BRP8 204 aaKnown RBP3.84□□□□□ -1.79
LIG4-205ENST00000614526 BHMT2Q9H2M3 363 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 IKZF4Q9H2S9 585 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 KCNMB3Q9NPA1 279 aa3.84□□□□□ -1.79
LIG4-205ENST00000614526 TESPA1A2RU30 521 aaPredicted RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 TMEM150BA6NC51 233 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 RSPH10B2B2RC85 870 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 PSMA7O14818 248 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 FOSP01100 380 aaPredicted RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 RSPH10BP0C881 870 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 GCFC2P16383 781 aaKnown RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 CDC25BP30305 580 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 BACE1P56817 501 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 RPS6P62753 249 aaKnown RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 UBXN1Q04323 297 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 STIM1Q13586 685 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 BAATQ14032 418 aaPredicted RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 KRT26Q7Z3Y9 468 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 FAM160B2Q86V87 743 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 VSTM4Q8IW00 320 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 SULF1Q8IWU6 871 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 BANK1Q8NDB2 785 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 ETNPPLQ8TBG4 499 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 CCDC47Q96A33 483 aaKnown RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 DCPSQ96C86 337 aaKnown RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 KLRG1Q96E93 195 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 OTUD5Q96G74 571 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 DYDC2Q96IM9 177 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 PCMTD1Q96MG8 357 aaPredicted RBP3.84□□□□□ -1.8
LIG4-205ENST00000614526 ZNF577Q9BSK1 485 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 DESI2Q9BSY9 194 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 KIAA1683Q9H0B3 1180 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 ELP3Q9H9T3 547 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 PANK4Q9NVE7 773 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 CLEC11AQ9Y240 323 aa3.84□□□□□ -1.8
LIG4-205ENST00000614526 FAM170AA1A519 330 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 B4DLN1 442 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RNF225M0QZC1 329 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 WDR46O15213 610 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 GAS7O60861 476 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 ZBED4O75132 1171 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 USP2O75604 605 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 RHOBTB3O94955 611 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 ICAM1P05362 532 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TPM3P06753 285 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 POTEJP0CG39 1038 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 ITGB5P18084 799 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 MTIF2P46199 727 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 KLK7P49862 253 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 MAP3K10Q02779 954 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RBL2Q08999 1139 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 MTF1Q14872 753 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 NR1I3Q14994 352 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CEP55Q53EZ4 464 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TCP11X2Q5H9J9 407 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 SNRNP48Q6IEG0 339 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 IRF2BP1Q8IU81 584 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 APOBEC3FQ8IUX4 373 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 KSR1Q8IVT5 923 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 GIMAP8Q8ND71 665 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 C7orf25Q9BPX7 421 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 EIF2AK1Q9BQI3 630 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 PAGR1Q9BTK6 254 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 GLT8D2Q9H1C3 349 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 SEMA6BQ9H3T3 888 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RWDD2AQ9UIY3 292 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 MORC2Q9Y6X9 1032 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 MYH7BA7E2Y1 1941 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 IGLV3-22A0A075B6J6 115 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RBAK-RBAKDNI3L0D1 243 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 VWA5AO00534 786 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 SPATA31C1P0DKV0 1188 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TNNT1P13805 278 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CASP14P31944 242 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 COPB1P53618 953 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 SPIRE1Q08AE8 756 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 VGLL4Q14135 290 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 ARSHQ5FYA8 562 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TREML2Q5T2D2 321 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 WDR78Q5VTH9 848 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 SPECC1LQ69YQ0 1117 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 GADL1Q6ZQY3 521 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 APTXQ7Z2E3 356 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 SLFN12Q8IYM2 578 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CCDC155Q8N6L0 562 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 NOC3LQ8WTT2 800 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 CRYGNQ8WXF5 182 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CLEC4DQ8WXI8 215 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 P2RX5Q93086 422 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RMDN3Q96TC7 470 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 ARID3AQ99856 593 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 DUSP9Q99956 384 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 R3HDMLQ9H3Y0 253 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 SLC38A10Q9HBR0 1119 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms