RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 AK2P54819 239 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 RHBDL3P58872 404 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 PPIL2Q13356 520 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 MTX1Q13505 466 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 SNCBQ16143 134 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 TMEM164Q5U3C3 297 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 NAIF1Q69YI7 327 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 GPAT2Q6NUI2 795 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 ARMCX5Q6P1M9 558 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 DNAJC14Q6Y2X3 702 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 ADGRA1Q86SQ6 560 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 CCDC83Q8IWF9 413 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 RBM12BQ8IXT5 1001 aaKnown RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 CKAP2LQ8IYA6 745 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 RPUSD2Q8IZ73 545 aaKnown RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 MIPOL1Q8TD10 442 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 SH3TC2Q8TF17 1288 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 ZFAND2BQ8WV99 257 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 CCDC47Q96A33 483 aaKnown RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 KIFC2Q96AC6 838 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 SHISA4Q96DD7 197 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 VCPKMTQ9H867 229 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 ZNF112Q9UJU3 913 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 PTPN22Q9Y2R2 807 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 CSADQ9Y600 493 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 MROH7-TTC4A0A0A0MT08 1334 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 MAST3O60307 1309 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 A0A1W2PQ27 194 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 A0A1W2PQ64 194 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 A0A1W2PQD8 194 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ERICH2A1L162 156 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CTAGE15A4D2H0 777 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 VWA3AA6NCI4 1184 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 GOLGA6L10A6NI86 522 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CFAP99D6REC4 459 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CDKL5O76039 1030 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 LUC7L3O95232 432 aaKnown RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 ALDH1A1P00352 501 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 LDHBP07195 334 aaKnown RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 CTAGE8P0CG41 777 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ATP5JP18859 108 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 GCKP35557 465 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 IL15P40933 162 aaPredicted RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 BTDP43251 543 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CD151P48509 253 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 TNNI2P48788 182 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 IRAK1P51617 712 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CLNS1AP54105 237 aaKnown RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 SH3BGRP55822 239 aaPredicted RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 INHBEP58166 350 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 GNG11P61952 73 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 SP3Q02447 781 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 FAM160A1Q05DH4 1040 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ACTN3Q08043 901 aaPredicted RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 TMED1Q13445 227 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CCDC40Q4G0X9 1142 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 VARS2Q5ST30 1063 aaKnown RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 NOL9Q5SY16 702 aaKnown RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 FKBP1CQ5VVH2 108 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CDCA2Q69YH5 1023 aaPredicted RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 IQCEQ6IPM2 695 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 PHLDB3Q6NSJ2 640 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 TLDC1Q6P9B6 456 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CPLX2Q6PUV4 134 aaKnown RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 RUFY3Q7L099 469 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 TMC6Q7Z403 805 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CTAGE6Q86UF2 777 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ERO1BQ86YB8 467 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CTAGE4Q8IX94 777 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CCDC148Q8NFR7 591 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 WDR66Q8TBY9 1149 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 FAM151AQ8WW52 585 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ARMC5Q96C12 935 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ZNF333Q96JL9 665 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 TRIM47Q96LD4 638 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ZNF396Q96N95 335 aaPredicted RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 DBNDD2Q9BQY9 259 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CRACR2AQ9BSW2 395 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CAPS2Q9BXY5 557 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ZNF341Q9BYN7 854 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 LRRCC1Q9C099 1032 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 DNAJC18Q9H819 358 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ANKZF1Q9H8Y5 726 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 ZSWIM6Q9HCJ5 1215 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 USP40Q9NVE5 1235 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 HMG20BQ9P0W2 317 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 KIAA1522Q9P206 1035 aaPredicted RBP5.65□□□□□ -1.5
SSX9-202ENST00000608568 CEP126Q9P2H0 1117 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CPA4Q9UI42 421 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 RCOR1Q9UKL0 485 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 PALD1Q9ULE6 856 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 KCNH4Q9UQ05 1017 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 PPP2R2CQ9Y2T4 447 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 SUGT1Q9Y2Z0 365 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 SNX14Q9Y5W7 946 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CYP46A1Q9Y6A2 500 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 CAPN7Q9Y6W3 813 aa5.65□□□□□ -1.5
SSX9-202ENST00000608568 NCOR1O75376 2440 aa5.65□□□□□ -1.51
SSX9-202ENST00000608568 CHD9Q3L8U1 2897 aa5.65□□□□□ -1.51
SSX9-202ENST00000608568 VPS37CA5D8V6 355 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms