RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 REV3LO60673 3130 aa9.75□□□□□ -0.85
NEDD4L-218ENST00000587547 TCHHQ07283 1943 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 MYH15Q9Y2K3 1946 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 CHD7Q9P2D1 2997 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 CCDC196A0A1B0GTZ2 297 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 SLC15A5A6NIM6 579 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 HOXC6P09630 235 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 RAG1P15918 1043 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 GNAQP50148 359 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 SNAP25P60880 206 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 ST3GAL1Q11201 340 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 GRB14Q14449 540 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 BECN1Q14457 450 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 LRRC41Q15345 812 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 GPATCH4Q5T3I0 446 aaKnown RBP9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 SYDE2Q5VT97 1194 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 CPLX2Q6PUV4 134 aaKnown RBP9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 TMTC3Q6ZXV5 915 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 CHURC1Q8WUH1 139 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 MAP3K14Q99558 947 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 NID2Q14112 1375 aa9.74□□□□□ -0.85
NEDD4L-218ENST00000587547 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 PQBP1O60828 265 aaKnown RBP9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 CFHP08603 1231 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 STAT2P52630 851 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 CATSPERGQ6ZRH7 1159 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 FAM160B2Q86V87 743 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 HOMER1Q86YM7 354 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 SRBD1Q8N5C6 995 aaKnown RBP9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 GTF3C2Q8WUA4 911 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 PHKBQ93100 1093 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 SLC26A6Q9BXS9 759 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 PRR12Q9ULL5 1215 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 CTDP1Q9Y5B0 961 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 MYH7BA7E2Y1 1941 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 CNTNAP5Q8WYK1 1306 aa9.73□□□□□ -0.85
NEDD4L-218ENST00000587547 KIAA1217Q5T5P2 1943 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 SEPT4O43236 478 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 JAK2O60674 1132 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 RNF40O75150 1001 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 CDKL5O76039 1030 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 MRE11P49959 708 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 SSRP1Q08945 709 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 FUT2Q10981 343 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 COG2Q14746 738 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 SLC35G1Q2M3R5 365 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 PRAMEF19Q5SWL8 479 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 RASIP1Q5U651 963 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 C16orf59Q7L2K0 433 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 ADGRF4Q8IZF3 695 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 ATG4CQ96DT6 458 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 DDX11Q96FC9 970 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 PIGSQ96S52 555 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 TMEM39AQ9NV64 488 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 PPP1R9AQ9ULJ8 1098 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 RABGAP1Q9Y3P9 1069 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 LCTP09848 1927 aa9.72□□□□□ -0.85
NEDD4L-218ENST00000587547 PTPDC1A2A3K4 754 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 CYTH3O43739 400 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 PLA2G6O60733 806 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 GPR37L1O60883 481 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 ZBED4O75132 1171 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 CTDNEP1O95476 244 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 IFNAR1P17181 557 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 CCNA1P78396 465 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 FAAP100Q0VG06 881 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 NTRK3Q16288 839 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 CDC37Q16543 378 aaPredicted RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 TMEM240Q5SV17 173 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 BTNL9Q6UXG8 535 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 TRIM22Q8IYM9 498 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 PRPF38AQ8NAV1 312 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 NSUN7Q8NE18 718 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 RRP36Q96EU6 259 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 ZFRQ96KR1 1074 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 SPZ1Q9BXG8 430 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 NKX2-4Q9H2Z4 354 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 RIOX1Q9H6W3 641 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 JMJD4Q9H9V9 463 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 BTBD7Q9P203 1132 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 SEC63Q9UGP8 760 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 PHF24Q9UPV7 400 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 YBX2Q9Y2T7 364 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 IVNS1ABPQ9Y6Y0 642 aa9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
NEDD4L-218ENST00000587547 A0A1W2PQ45 241 aaPredicted RBP9.7□□□□□ -0.86
NEDD4L-218ENST00000587547 A0A1W2PQY0 241 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms