RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 C17orf50Q8WW18 174 aa16.99■□□□□ 0.31
TRAPPC8-210ENST00000582513 PANX2Q96RD6 677 aa16.99■□□□□ 0.31
TRAPPC8-210ENST00000582513 OSBPL1AQ9BXW6 950 aa16.99■□□□□ 0.31
TRAPPC8-210ENST00000582513 NOD2Q9HC29 1040 aa16.99■□□□□ 0.31
TRAPPC8-210ENST00000582513 CDC23Q9UJX2 597 aa16.99■□□□□ 0.31
TRAPPC8-210ENST00000582513 PBX1P40424 430 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 TCERG1LQ5VWI1 586 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 PDXDC2PQ6P474 469 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 KCNV2Q8TDN2 545 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 CUL5Q93034 780 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 B4DLN1 442 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 SMNDC1O75940 238 aaKnown RBP eCLIP16.98■□□□□ 0.313e-7■□□□□ 8.1
TRAPPC8-210ENST00000582513 FGRP09769 529 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 PPP1R15BQ5SWA1 713 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 SLC44A5Q8NCS7 719 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 NELFBQ8WX92 580 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 BMP15O95972 392 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 GUCY1A3Q02108 690 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 RASA3Q14644 834 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 PFKFB3Q16875 520 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 UNC45AQ9H3U1 944 aa16.98■□□□□ 0.31
TRAPPC8-210ENST00000582513 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 LRRD1A4D1F6 860 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 BACH1O14867 736 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 GPR101Q96P66 508 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 BZW2Q9Y6E2 419 aaKnown RBP16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 KIF5BP33176 963 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 PDIA5Q14554 519 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 OLFML1Q6UWY5 402 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 MYH8P13535 1937 aa16.97■□□□□ 0.31
TRAPPC8-210ENST00000582513 PDHA1P08559 390 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 GOLGA8HP0CJ92 632 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 PRCPP42785 496 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 ERVK-24P63145 666 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 PAK1Q13153 545 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 CTNNBL1Q8WYA6 563 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 CAPZA3Q96KX2 299 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 CTAGE1Q96RT6 745 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 MMTAG2Q9BU76 263 aaKnown RBP16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 RAB21Q9UL25 225 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 ORC4O43929 436 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 CYP11B2P19099 503 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 STAT6P42226 847 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 SFMBT2Q5VUG0 894 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 NAA35Q5VZE5 725 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 BLIDQ8IZY5 108 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 RPN1P04843 607 aaKnown RBP16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 ZNF24P17028 368 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 ATP4AP20648 1035 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 COPB1P53618 953 aaKnown RBP16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 SLC35F6Q8N357 371 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 PNMA1Q8ND90 353 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 NLRP3Q96P20 1036 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 ARPC5LQ9BPX5 153 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 SLF1Q9BQI6 1058 aa16.96■□□□□ 0.31
TRAPPC8-210ENST00000582513 CTAGE9A4FU28 777 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 KCNJ18B7U540 433 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 FUT4P22083 530 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 GRIK5Q16478 980 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 SND1Q7KZF4 910 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 GALNT8Q9NY28 637 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 LINGO3P0C6S8 592 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 PMS1P54277 932 aaKnown RBP16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 HEATR3Q7Z4Q2 680 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 C15orf41Q9Y2V0 281 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 C2CD2Q9Y426 696 aa16.95■□□□□ 0.3
TRAPPC8-210ENST00000582513 OPA1O60313 960 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 DESP17661 470 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 UBXN1Q04323 297 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 SLC35G1Q2M3R5 365 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 CHP1Q99653 195 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 UBE2OQ9C0C9 1292 aaKnown RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 SPATA7Q9P0W8 599 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 CORO1CQ9ULV4 474 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 COL16A1Q07092 1604 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 KRT9P35527 623 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 FAM98CQ17RN3 349 aaKnown RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 TCP11X2Q5H9J9 407 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 FAM182BQ5T319 152 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 CAGE1Q8TC20 777 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms