RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PLEKHG4Q58EX7 1191 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 ASTLQ6HA08 431 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 VN1R2Q8NFZ6 395 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 SCFD2Q8WU76 684 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 MKNK2Q9HBH9 465 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 R4GN57 208 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 ANKRD11Q6UB99 2663 aaPredicted RBP16.77■□□□□ 0.27
CSNK1D-213ENST00000580446 SORBS3O60504 671 aa16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 MCCP23508 829 aa16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 LY6KQ17RY6 165 aa16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 RSPO4Q2I0M5 234 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 FLCNQ8NFG4 579 aa16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 NLRC5Q86WI3 1866 aa16.76■□□□□ 0.27
CSNK1D-213ENST00000580446 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 NKRFO15226 690 aaKnown RBP eCLIP16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 PI15O43692 258 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 MFSD10Q14728 455 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 GMCL1P1Q8NEA9 526 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 SEPT8Q92599 483 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 MFSD1Q9H3U5 465 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 PRR12Q9ULL5 1215 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 PLAGL2Q9UPG8 496 aa16.75■□□□□ 0.27
CSNK1D-213ENST00000580446 RB1P06400 928 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 ARHGAP1Q07960 439 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 ANGPT1Q15389 498 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 SUSD6Q92537 303 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 MTMR4Q9NYA4 1195 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 DLL3Q9NYJ7 618 aa16.74■□□□□ 0.27
CSNK1D-213ENST00000580446 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 LMNAP02545 664 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 ITGB1P05556 798 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 ASGR2P07307 311 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 CWF19L1Q69YN2 538 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 TMED8Q6PL24 325 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 SEPT14Q6ZU15 432 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
CSNK1D-213ENST00000580446 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 ADD2P35612 726 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 SLC1A4P43007 532 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 MTMR3Q13615 1198 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 BTG3Q14201 252 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 RPAP2Q8IXW5 612 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 MKL1Q969V6 931 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 COL26A1Q96A83 441 aa16.72■□□□□ 0.27
CSNK1D-213ENST00000580446 TTLL1O95922 423 aa16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 FDX1P10109 184 aa16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 SLC16A2P36021 539 aa16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 SLFN5Q08AF3 891 aa16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 SPPL3Q8TCT6 385 aa16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 MRPL42Q9Y6G3 142 aaKnown RBP16.71■□□□□ 0.27
CSNK1D-213ENST00000580446 GH1P01241 217 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 ICAM1P05362 532 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 ATF7P17544 494 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 POF1BQ8WVV4 589 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 RIN2Q8WYP3 895 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 CLP1Q92989 425 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 TLE6Q9H808 572 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 RC3H2Q9HBD1 1191 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 SORCS3Q9UPU3 1222 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 EXOC6BQ9Y2D4 811 aa16.7■□□□□ 0.26
CSNK1D-213ENST00000580446 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 C2CD4DB7Z1M9 353 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 EDNRBP24530 442 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 ATP8B2P98198 1209 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 PAN2Q504Q3 1202 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 TTBK2Q6IQ55 1244 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 LLGL2Q6P1M3 1020 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 SERINC5Q86VE9 423 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 CLEC4DQ8WXI8 215 aa16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-213ENST00000580446 HAS3O00219 553 aa16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 F2P00734 622 aa16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 RPS6P62753 249 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 DGKDQ16760 1214 aa16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 GMCL1Q96IK5 515 aa16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 CHAMP1Q96JM3 812 aa16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 NOP58Q9Y2X3 529 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-213ENST00000580446 GPR179Q6PRD1 2367 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms