RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 PPP2R3AQ06190 1150 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 TNIP1Q15025 636 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 KCTD1Q719H9 257 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 CCDC84Q86UT8 332 aaPredicted RBP9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 REXO1L1PQ8IX06 675 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 ZFPM1Q8IX07 1006 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 NIM1KQ8IY84 436 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 LPAR1Q92633 364 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 HAS1Q92839 578 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 TRIM47Q96LD4 638 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 CEP63Q96MT8 703 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 PNMA5Q96PV4 448 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 DNAJC7Q99615 494 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 TSG101Q99816 390 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 CPVLQ9H3G5 476 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 TDRD3Q9H7E2 651 aaKnown RBP9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 VCPKMTQ9H867 229 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 TMEM260Q9NX78 707 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 KCND2Q9NZV8 630 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 DNAI1Q9UI46 699 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 FEM1BQ9UK73 627 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 MTMR7Q9Y216 660 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 MRPL11Q9Y3B7 192 aaKnown RBP9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 CNTNAP1P78357 1384 aa9.88□□□□□ -0.83
PPP4R1-213ENST00000579609 USP27XA6NNY8 438 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 PP2D1A8MPX8 630 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 C21orf2O43822 256 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 MARCH6O60337 910 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 TDP2O95551 362 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 GH2P01242 217 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 GYPCP04921 128 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 RPA1P27694 616 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 STX17P56962 302 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 ZNF280AP59817 542 aaPredicted RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 ARHGAP4P98171 946 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 SETQ01105 290 aaPredicted RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 ATP2B2Q01814 1243 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 EN1Q05925 392 aaPredicted RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 TCP10Q12799 353 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 TSR1Q2NL82 804 aaKnown RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 TTBK2Q6IQ55 1244 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 NIPA1Q7RTP0 329 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 IRF2BP1Q8IU81 584 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 CCDC65Q8IXS2 484 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 TXLNBQ8N3L3 684 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 MB21D1Q8N884 522 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 ETNPPLQ8TBG4 499 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 NEK9Q8TD19 979 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 POLR3CQ9BUI4 534 aaPredicted RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 NUCKS1Q9H1E3 243 aaKnown RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 RANBP17Q9H2T7 1088 aaKnown RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 ABHD10Q9NUJ1 306 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 PIM2Q9P1W9 311 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 CGNQ9P2M7 1197 aaKnown RBP9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 ZBTB21Q9ULJ3 1066 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 CAPN11Q9UMQ6 739 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 DAAM1Q9Y4D1 1078 aa9.87□□□□□ -0.83
PPP4R1-213ENST00000579609 MYMKA6NI61 221 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 PSMD14O00487 310 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 TEX33O43247 280 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 BCRP11274 1271 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 KCNA3P22001 575 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 CASP1P29466 404 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 CDC25AP30304 524 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 HNRNPH3P31942 346 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 CAP2P40123 477 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 ZBED6P86452 979 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 RBL2Q08999 1139 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 DOCK1Q14185 1865 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 MEA1Q16626 185 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 EDRF1Q3B7T1 1238 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 FKBP15Q5T1M5 1219 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 TRIM65Q6PJ69 517 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 KRT26Q7Z3Y9 468 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 ZC3H3Q8IXZ2 948 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 SMYD4Q8IYR2 804 aaPredicted RBP9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 CCDC170Q8IYT3 715 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 EHBP1Q8NDI1 1231 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 ZNF397Q8NF99 534 aaPredicted RBP9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 OR8K1Q8NGG5 319 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 STAMQ92783 540 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 TUBGCP2Q9BSJ2 902 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 PGAP2Q9UHJ9 254 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 PRR12Q9ULL5 1215 aa9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 LUC7L2Q9Y383 392 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-213ENST00000579609 EP400Q96L91 3159 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 UBE4BO95155 1302 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 WDR46O15213 610 aaKnown RBP9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 POLD1P28340 1107 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 CASP14P31944 242 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 SLC16A2P36021 539 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 CCT6AP40227 531 aaKnown RBP9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 KRT83P78385 493 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 UBXN1Q04323 297 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 SPIRE1Q08AE8 756 aa9.85□□□□□ -0.83
PPP4R1-213ENST00000579609 STK4Q13043 487 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms