RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 GPR108Q9NPR9 543 aa17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 MCM9Q9NXL9 1143 aa17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 HDAC6Q9UBN7 1215 aa17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 LIMD1Q9UGP4 676 aa17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 IGSF10Q6WRI0 2623 aa17.52■□□□□ 0.4
SLC12A4-216ENST00000576377 TAF4O00268 1085 aa17.51■□□□□ 0.39
SLC12A4-216ENST00000576377 ANKRD54Q6NXT1 300 aa17.51■□□□□ 0.39
SLC12A4-216ENST00000576377 P2RX5Q93086 422 aa17.51■□□□□ 0.39
SLC12A4-216ENST00000576377 DMXL2Q8TDJ6 3036 aa17.5■□□□□ 0.39
SLC12A4-216ENST00000576377 TECP42680 631 aa17.5■□□□□ 0.39
SLC12A4-216ENST00000576377 DUSP6Q16828 381 aa17.5■□□□□ 0.39
SLC12A4-216ENST00000576377 N4BP2L1Q5TBK1 243 aaPredicted RBP17.5■□□□□ 0.39
SLC12A4-216ENST00000576377 KLHL23Q8NBE8 558 aa17.5■□□□□ 0.39
SLC12A4-216ENST00000576377 SEPT8Q92599 483 aa17.5■□□□□ 0.39
SLC12A4-216ENST00000576377 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 NDUFB10O96000 172 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 ZAP70P43403 619 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 OAZ1P54368 228 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 SPECC1Q5M775 1068 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 UNQ6494/PRO21346Q6UXR6 183 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 SWAP70Q9UH65 585 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 FBXL21Q9UKT6 434 aa17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
SLC12A4-216ENST00000576377 COL4A3Q01955 1670 aa17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 POTEMA6NI47 508 aa17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 MMP3P08254 477 aa17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 KCNC3Q14003 757 aa17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 BTG3Q14201 252 aaPredicted RBP17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 HIC1Q14526 733 aa17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 POTEGQ6S5H5 508 aa17.48■□□□□ 0.39
SLC12A4-216ENST00000576377 GREB1LQ9C091 1923 aaPredicted RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 AKAP13Q12802 2813 aa17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 DCNP07585 359 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 THPOP40225 353 aa17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 MAML2Q8IZL2 1156 aaPredicted RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 KDF1Q8NAX2 398 aaPredicted RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 NETO1Q8TDF5 533 aa17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 KANSL2Q9H9L4 492 aa17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 SMG5Q9UPR3 1016 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-216ENST00000576377 SRRM3A6NNA2 597 aaPredicted RBP17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 STK25O00506 426 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 LLGL2Q6P1M3 1020 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 C1orf210Q8IVY1 113 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 ZDHHC14Q8IZN3 488 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 C7orf31Q8N865 590 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 TDRD5Q8NAT2 981 aaKnown RBP17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 AFG1LQ8WV93 481 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 ALG1Q9BT22 464 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 DLGAP2Q9P1A6 1054 aa17.46■□□□□ 0.39
SLC12A4-216ENST00000576377 KRBA1A5PL33 1030 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 F5H6K3 240 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.381e-7■■■■□ 20
SLC12A4-216ENST00000576377 ARIH2O95376 493 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 ALDH5A1P51649 535 aaPredicted RBP17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 PDE4BQ07343 736 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 KLRC3Q07444 240 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 SOWAHCQ53LP3 525 aaPredicted RBP17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 TMEM184AQ6ZMB5 413 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 LRRC47Q8N1G4 583 aaKnown RBP17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 SDR42E1Q8WUS8 393 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
SLC12A4-216ENST00000576377 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 SPTLC1O15269 473 aa17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 ALAS1P13196 640 aa17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 TBC1D8BQ0IIM8 1120 aa17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 SECISBP2LQ93073 1101 aaKnown RBP17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 CDCA3Q99618 268 aaPredicted RBP17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 DUSP12Q9UNI6 340 aa17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 BAZ2AQ9UIF9 1905 aaKnown RBP17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 LAMA5O15230 3695 aa17.44■□□□□ 0.38
SLC12A4-216ENST00000576377 MYH7BA7E2Y1 1941 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 PPFIA3O75145 1194 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 WEE2P0C1S8 567 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 CDK8P49336 464 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 PSEN2P49810 448 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 NAALADL2Q58DX5 795 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 NSMFQ6X4W1 530 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 MICAL1Q8TDZ2 1067 aa17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 DCP1AQ9NPI6 582 aaPredicted RBP17.43■□□□□ 0.38
SLC12A4-216ENST00000576377 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
SLC12A4-216ENST00000576377 CTSHP09668 335 aa17.42■□□□□ 0.38
SLC12A4-216ENST00000576377 TBC1D17Q9HA65 648 aa17.42■□□□□ 0.38
SLC12A4-216ENST00000576377 TENM4Q6N022 2769 aa17.42■□□□□ 0.38
SLC12A4-216ENST00000576377 NARSO43776 548 aaKnown RBP17.41■□□□□ 0.38
SLC12A4-216ENST00000576377 IGSF3O75054 1194 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms