RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TNNC1P63316 161 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 BIRC2Q13490 618 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 ENOX2Q16206 610 aaKnown RBP15.85■□□□□ 0.13
SMG6-215ENST00000574501 EGFL6Q8IUX8 553 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 SPDL1Q96EA4 605 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 PLA2G12BQ9BX93 195 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 KDM4CQ9H3R0 1056 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 ZNF335Q9H4Z2 1342 aaPredicted RBP15.85■□□□□ 0.13
SMG6-215ENST00000574501 PLCG1P19174 1290 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 PEX19P40855 299 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 BIRC3Q13489 604 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 MEI1Q5TIA1 1274 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 HGSNATQ68CP4 663 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 RUFY4Q6ZNE9 571 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 ADGRA1Q86SQ6 560 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.13
SMG6-215ENST00000574501 AP1M1Q9BXS5 423 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 GRID2IPA4D2P6 1211 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 KCNK3O14649 394 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 ORC4O43929 436 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 TRIM37O94972 964 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 CHRNA2Q15822 529 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 PDXDC1Q6P996 788 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 TRIM9Q9C026 710 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 GOLPH3Q9H4A6 298 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMG6-215ENST00000574501 EME2A4GXA9 379 aaPredicted RBP15.84■□□□□ 0.13
SMG6-215ENST00000574501 ANP32DO95626 131 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 MYBP10242 640 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 CTSWP56202 376 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 IRX1P78414 480 aaPredicted RBP15.84■□□□□ 0.13
SMG6-215ENST00000574501 ARID5AQ03989 594 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 PUM3Q15397 648 aaKnown RBP15.84■□□□□ 0.13
SMG6-215ENST00000574501 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 KRT28Q7Z3Y7 464 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 TBC1D1Q86TI0 1168 aaPredicted RBP15.84■□□□□ 0.13
SMG6-215ENST00000574501 KIAA0895Q8NCT3 520 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 LRRC45Q96CN5 670 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 PACSIN1Q9BY11 444 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 KIF9Q9HAQ2 790 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 LRP2BPQ9P2M1 347 aa15.84■□□□□ 0.13
SMG6-215ENST00000574501 CCT8L1PA6NM43 557 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 SLC8A3P57103 927 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 KRT71Q3SY84 523 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 ZNF483Q8TF39 744 aaPredicted RBP15.83■□□□□ 0.12
SMG6-215ENST00000574501 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMG6-215ENST00000574501 TANGO6Q9C0B7 1094 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 PNPLA7Q6ZV29 1317 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 EVX2Q03828 476 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 GRIK3Q13003 919 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 NAB2Q15742 525 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 ZKSCAN8Q15776 578 aaPredicted RBP15.83■□□□□ 0.12
SMG6-215ENST00000574501 BLIDQ8IZY5 108 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 STAG2Q8N3U4 1231 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 MAB21L3Q8N8X9 362 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 CCDC63Q8NA47 563 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 RNF217Q8TC41 542 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 CCDC47Q96A33 483 aaKnown RBP15.83■□□□□ 0.12
SMG6-215ENST00000574501 HOOK2Q96ED9 719 aa15.83■□□□□ 0.12
SMG6-215ENST00000574501 KIF3CO14782 793 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 CTNND1O60716 968 aaKnown RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 MYL1P05976 194 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 PAEPP09466 180 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 GHRP10912 638 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 CYP7A1P22680 504 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 BCAMP50895 628 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 PFKFB3Q16875 520 aaPredicted RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 INF2Q27J81 1249 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 C11orf91Q3C1V1 193 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 FAM133BQ5BKY9 247 aaKnown RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 CCDC84Q86UT8 332 aaPredicted RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 TBC1D5Q92609 795 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 IQCDQ96DY2 449 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 CHMP6Q96FZ7 201 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 DDX47Q9H0S4 455 aaKnown RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 EBF2Q9HAK2 575 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 DAPK3O43293 454 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 TLR2O60603 784 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 CALRP27797 417 aaKnown RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 SARNPP82979 210 aaKnown RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 KIAA0753Q2KHM9 967 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 AGBL2Q5U5Z8 902 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 RCSD1Q6JBY9 416 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 BZW1Q7L1Q6 419 aaKnown RBP15.82■□□□□ 0.12
SMG6-215ENST00000574501 ARMC9Q7Z3E5 817 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 CCDC197Q8NCU1 140 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 TMEM59LQ9UK28 342 aa15.82■□□□□ 0.12
SMG6-215ENST00000574501 SSU72P8A0A1W2PR75 194 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 IRS4O14654 1257 aaPredicted RBP15.81■□□□□ 0.12
SMG6-215ENST00000574501 CEP104O60308 925 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 INHBEP58166 350 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
SMG6-215ENST00000574501 CUL1Q13616 776 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 MAN2A1Q16706 1144 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 SLC9C1Q4G0N8 1177 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 CABP7Q86V35 215 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 DNAAF5Q86Y56 855 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 ARMC2Q8NEN0 867 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms