RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 C7orf31Q8N865 590 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 AFG1LQ8WV93 481 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 SEPT8Q92599 483 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 RC3H2Q9HBD1 1191 aaKnown RBP13.4□□□□□ -0.26
CDH3-208ENST00000569036 PLAGL2Q9UPG8 496 aa13.4□□□□□ -0.26
CDH3-208ENST00000569036 FANCMQ8IYD8 2048 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 ZFYVE26Q68DK2 2539 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 TMEM232C9JQI7 657 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 BMP3P12645 472 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 RASA1P20936 1047 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 STAT2P52630 851 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CDH3-208ENST00000569036 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
CDH3-208ENST00000569036 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
CDH3-208ENST00000569036 BAATQ14032 418 aaPredicted RBP13.39□□□□□ -0.27
CDH3-208ENST00000569036 DCLK2Q8N568 766 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 RUBCNQ92622 972 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 PLVAPQ9BX97 442 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 OSBPL7Q9BZF2 842 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 R4GN57 208 aa13.39□□□□□ -0.27
CDH3-208ENST00000569036 IGKV6D-41A0A0C4DH26 115 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 PI15O43692 258 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 MBD4O95243 580 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 THPOP40225 353 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 PSEN2P49810 448 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 SNAP25P60880 206 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 KIAA0319Q5VV43 1072 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 VN1R2Q8NFZ6 395 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
CDH3-208ENST00000569036 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
CDH3-208ENST00000569036 ISY1Q9ULR0 285 aaKnown RBP13.38□□□□□ -0.27
CDH3-208ENST00000569036 NOB1Q9ULX3 412 aaKnown RBP13.38□□□□□ -0.27
CDH3-208ENST00000569036 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
CDH3-208ENST00000569036 ITGB1P05556 798 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 AOC1P19801 751 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 ATXN1P54253 815 aaKnown RBP13.37□□□□□ -0.27
CDH3-208ENST00000569036 PDE4DQ08499 809 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 IKQ13123 557 aaPredicted RBP13.37□□□□□ -0.27
CDH3-208ENST00000569036 HIC1Q14526 733 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 SLFN13Q68D06 897 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 DTWD2Q8NBA8 298 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 P2RX5Q93086 422 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 MKL1Q969V6 931 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 SYNPO2Q9UMS6 1093 aa13.37□□□□□ -0.27
CDH3-208ENST00000569036 SPEGQ15772 3267 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 FRYQ5TBA9 3013 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 GNAI2P04899 355 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
CDH3-208ENST00000569036 EDNRBP24530 442 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 ARHGAP1Q07960 439 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 MFSD10Q14728 455 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 TTF1Q15361 905 aaPredicted RBP13.36□□□□□ -0.27
CDH3-208ENST00000569036 SLC30A10Q6XR72 485 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 SERINC5Q86VE9 423 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 CHURC1Q8WUH1 139 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 STAG1Q8WVM7 1258 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 S1PR5Q9H228 398 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 TLE6Q9H808 572 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 ZZEF1O43149 2961 aa13.36□□□□□ -0.27
CDH3-208ENST00000569036 HAS3O00219 553 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 NFIBO00712 420 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 F2P00734 622 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 ADRB1P08588 477 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 POLA2Q14181 598 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 BTG3Q14201 252 aaPredicted RBP13.35□□□□□ -0.27
CDH3-208ENST00000569036 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 CCDC62Q6P9F0 684 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 KATNAL1Q9BW62 490 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
CDH3-208ENST00000569036 MYH7BA7E2Y1 1941 aa13.35□□□□□ -0.27
CDH3-208ENST00000569036 PTPDC1A2A3K4 754 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 C2CD4DB7Z1M9 353 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 PER2O15055 1255 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 GH1P01241 217 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 ZNF286BP0CG31 522 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 NPR3P17342 541 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 SDHBP21912 280 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 DGKDQ16760 1214 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 CHST3Q7LGC8 479 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 STK11IPQ8N1F8 1099 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 APBB2Q92870 758 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
CDH3-208ENST00000569036 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms