RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SOWAHDA6NJG2 315 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 E9PMD0 336 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 MED24O75448 989 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 TRIM65Q6PJ69 517 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 EEF2KMTQ96G04 330 aa20.21■□□□□ 0.83
SMPD3-211ENST00000568373 GCOM1H8Y6P7 765 aaPredicted RBP20.2■□□□□ 0.82
SMPD3-211ENST00000568373 MSH4O15457 936 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 EGFRP00533 1210 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 CFBP00751 764 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 SSBP05455 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMPD3-211ENST00000568373 POLR2MP0CAP2 368 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 DNM2P50570 870 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 COASYQ13057 564 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 MTF1Q14872 753 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 CCDC84Q86UT8 332 aaPredicted RBP20.2■□□□□ 0.82
SMPD3-211ENST00000568373 ERMNQ8TAM6 284 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 TEPSINQ96N21 525 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 ABHD10Q9NUJ1 306 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 SCAF8Q9UPN6 1271 aaKnown RBP20.2■□□□□ 0.82
SMPD3-211ENST00000568373 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
SMPD3-211ENST00000568373 STK24Q9Y6E0 443 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 PHLPP2Q6ZVD8 1323 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 PES1O00541 588 aaKnown RBP20.2■□□□□ 0.82
SMPD3-211ENST00000568373 ZNF76P36508 570 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 PANK4Q9NVE7 773 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 FBXO28Q9NVF7 368 aa20.2■□□□□ 0.82
SMPD3-211ENST00000568373 B4DLN1 442 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 LRRC63Q05C16 580 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 NCAPH2Q6IBW4 605 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 FOXR2Q6PJQ5 311 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 RAD9BQ6WBX8 426 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 CATSPER3Q86XQ3 398 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 CYP2W1Q8TAV3 490 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 TBC1D5Q92609 795 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 FEZ1Q99689 392 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 DESI2Q9BSY9 194 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 ZNF341Q9BYN7 854 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 VAV3Q9UKW4 847 aa20.19■□□□□ 0.82
SMPD3-211ENST00000568373 IGLV3-22A0A075B6J6 115 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 POTEFA5A3E0 1075 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 RNF225M0QZC1 329 aaPredicted RBP20.18■□□□□ 0.82
SMPD3-211ENST00000568373 CCDC175P0C221 793 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 POTEIP0CG38 1075 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 RPA1P27694 616 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 POTEGQ6S5H5 508 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 POTEEQ6S8J3 1075 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 GPBP1Q86WP2 473 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 BCS1LQ9Y276 419 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 ABCB11O95342 1321 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 SOCS7O14512 581 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 CYP11B2P19099 503 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 KRT9P35527 623 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 MTIF2P46199 727 aaKnown RBP20.18■□□□□ 0.82
SMPD3-211ENST00000568373 SLC12A3P55017 1021 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 FAM26FQ5R3K3 315 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 TMTC1Q8IUR5 882 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 CCDC65Q8IXS2 484 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 DNAI1Q9UI46 699 aa20.18■□□□□ 0.82
SMPD3-211ENST00000568373 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 FGFR1OPO95684 399 aaKnown RBP20.17■□□□□ 0.82
SMPD3-211ENST00000568373 SPATA31C1P0DKV0 1188 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 LDHDQ86WU2 507 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 MYOCDQ8IZQ8 938 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 GLIS3Q8NEA6 775 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 NLGN2Q8NFZ4 835 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 L2HGDHQ9H9P8 463 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 ADGRG1Q9Y653 693 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 GMPSP49915 693 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-211ENST00000568373 LRRC41Q15345 812 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 SYCP1Q15431 976 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 MIIPQ5JXC2 388 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 SAMD1Q6SPF0 538 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-211ENST00000568373 MICALL2Q8IY33 904 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 NOC4LQ9BVI4 516 aaKnown RBP20.17■□□□□ 0.82
SMPD3-211ENST00000568373 EHMT1Q9H9B1 1298 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 CD2APQ9Y5K6 639 aa20.17■□□□□ 0.82
SMPD3-211ENST00000568373 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
SMPD3-211ENST00000568373 TTC26A0AVF1 554 aa20.16■□□□□ 0.82
SMPD3-211ENST00000568373 TBC1D8BQ0IIM8 1120 aa20.16■□□□□ 0.82
SMPD3-211ENST00000568373 CYP26C1Q6V0L0 522 aa20.16■□□□□ 0.82
SMPD3-211ENST00000568373 GINM1Q9NU53 330 aa20.16■□□□□ 0.82
SMPD3-211ENST00000568373 DNM3Q9UQ16 869 aa20.16■□□□□ 0.82
SMPD3-211ENST00000568373 INPP5BP32019 993 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 ERVK-24P63145 666 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 ARSHQ5FYA8 562 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 LPAR1Q92633 364 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 TSG101Q99816 390 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 WDR18Q9BV38 432 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 MRPL44Q9H9J2 332 aaKnown RBP20.15■□□□□ 0.82
SMPD3-211ENST00000568373 CAPN11Q9UMQ6 739 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 PCDHA2Q9Y5H9 948 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 NPHP3-ACAD11A0A0J9YXS1 232 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 FRMD3A2A2Y4 597 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms