RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CDC25BP30305 580 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 STAT6P42226 847 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 MORC3Q14149 939 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 UBE2SQ16763 222 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 PDXDC2PQ6P474 469 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 ERO1BQ86YB8 467 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 DHX40Q8IX18 779 aaKnown RBP16.45■□□□□ 0.22
COMMD4-221ENST00000567935 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 SAMD3Q8N6K7 520 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 IGSF22Q8N9C0 903 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 MBOAT7Q96N66 472 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-221ENST00000567935 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 MRPL11Q9Y3B7 192 aaKnown RBP16.45■□□□□ 0.22
COMMD4-221ENST00000567935 MYH7BA7E2Y1 1941 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 SPDYE3A6NKU9 549 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 BIN1O00499 593 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 MEIS2O14770 477 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 TBX3O15119 743 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 PTMAP06454 111 aaKnown RBP16.44■□□□□ 0.22
COMMD4-221ENST00000567935 PLA2G5P39877 138 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 DPYDQ12882 1025 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 RRAGBQ5VZM2 374 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 FAM109BQ6ICB4 259 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-221ENST00000567935 AOPEPQ8N6M6 819 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 RASSF8Q8NHQ8 419 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-221ENST00000567935 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
COMMD4-221ENST00000567935 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
COMMD4-221ENST00000567935 PDHXO00330 501 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 ERCC5P28715 1186 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-221ENST00000567935 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-221ENST00000567935 SREBF1P36956 1147 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 FCGRTP55899 365 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 PLCB2Q00722 1185 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 MYL5Q02045 173 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 PPIL2Q13356 520 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
COMMD4-221ENST00000567935 CABP7Q86V35 215 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 SLFN12Q8IYM2 578 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 PRPF38AQ8NAV1 312 aaKnown RBP16.43■□□□□ 0.22
COMMD4-221ENST00000567935 ZKSCAN4Q969J2 545 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-221ENST00000567935 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 TRIM5Q9C035 493 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 RABGAP1Q9Y3P9 1069 aa16.43■□□□□ 0.22
COMMD4-221ENST00000567935 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
COMMD4-221ENST00000567935 TDP2O95551 362 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 CYP3A4P08684 503 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 CIITAP33076 1130 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 ZNF75DP51815 510 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 ZSCAN30Q86W11 494 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 MAFAQ8NHW3 353 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-221ENST00000567935 CRYGNQ8WXF5 182 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 MRFAP1L1Q96HT8 127 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 TTC28Q96AY4 2481 aa16.42■□□□□ 0.22
COMMD4-221ENST00000567935 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 GCOM1H8Y6P7 765 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-221ENST00000567935 MARCH6O60337 910 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 POLR2MP0CAP2 368 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 BCRP11274 1271 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 CAPN2P17655 700 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 FLT3LGP49771 235 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 ARHGAP4P98171 946 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 AMPD3Q01432 767 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
COMMD4-221ENST00000567935 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USH1GQ495M9 461 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 Q4G0T1 1027 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
COMMD4-221ENST00000567935 C12orf42Q96LP6 360 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 LRRC27Q9C0I9 530 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 MAP3K20Q9NYL2 800 aaKnown RBP16.41■□□□□ 0.22
COMMD4-221ENST00000567935 LRWD1Q9UFC0 647 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 MGAMO43451 1857 aa16.41■□□□□ 0.22
COMMD4-221ENST00000567935 ESPNB1AK53 854 aa16.4■□□□□ 0.22
COMMD4-221ENST00000567935 SLC37A4O43826 429 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms