RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 JADE2Q9NQC1 790 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 KIAA1522Q9P206 1035 aaPredicted RBP5.47□□□□□ -1.53
CDH1-211ENST00000567320 CROTQ9UKG9 612 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 PCDHB4Q9Y5E5 795 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 X6R8D5 127 aa5.47□□□□□ -1.53
CDH1-211ENST00000567320 AGRPO00253 132 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 DGKIO75912 1065 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 LCP1P13796 627 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 CYP4F3Q08477 520 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 GNL2Q13823 731 aaKnown RBP5.46□□□□□ -1.54
CDH1-211ENST00000567320 FXNQ16595 210 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 LIMS2Q7Z4I7 341 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 NLRP10Q86W26 655 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDH1-211ENST00000567320 FBXL7Q9UJT9 491 aa5.46□□□□□ -1.54
CDH1-211ENST00000567320 R3HCC1Q9Y3T6 440 aaKnown RBP5.46□□□□□ -1.54
CDH1-211ENST00000567320 UNCXA6NJT0 531 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 ERCC5P28715 1186 aaPredicted RBP5.45□□□□□ -1.54
CDH1-211ENST00000567320 CR1LQ2VPA4 569 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 CPZQ66K79 652 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 TMEM145Q8NBT3 493 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 ARRDC4Q8NCT1 418 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 SAMD11Q96NU1 681 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 RBM15Q96T37 977 aaKnown RBP eCLIP5.45□□□□□ -1.54
CDH1-211ENST00000567320 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 DTLQ9NZJ0 730 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 ST6GALNAC2Q9UJ37 374 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 ZNF652Q9Y2D9 606 aa5.45□□□□□ -1.54
CDH1-211ENST00000567320 H7BY64 318 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 ARNTLO00327 626 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 CYP7B1O75881 506 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 SCG5P05408 212 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 IL13P35225 146 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 ETFBP38117 255 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 ADAM9Q13443 819 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 SURF1Q15526 300 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 ACBD5Q5T8D3 534 aaPredicted RBP5.44□□□□□ -1.54
CDH1-211ENST00000567320 EEPD1Q7L9B9 569 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 PLEKHH3Q7Z736 793 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 KREMEN2Q8NCW0 462 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 EPB41L1Q9H4G0 881 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 MYOTQ9UBF9 498 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 PRKAG3Q9UGI9 489 aa5.44□□□□□ -1.54
CDH1-211ENST00000567320 TCRBV5S2A0A599 114 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 NPEPPSL1A6NEC2 478 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 KRIT1O00522 736 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 LAMTOR5O43504 91 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 MAFKO60675 156 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 ZNF20P17024 532 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 GFRA1P56159 465 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 ZXDAP98168 799 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 PRR31Q5SQ13 230 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 TRMT10BQ6PF06 316 aaKnown RBP5.43□□□□□ -1.54
CDH1-211ENST00000567320 TEPPQ6URK8 271 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 TMC5Q6UXY8 1006 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 Q8N1Y9 231 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 KISS1RQ969F8 398 aaPredicted RBP5.43□□□□□ -1.54
CDH1-211ENST00000567320 FTSJ1Q9UET6 329 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 ZDHHC9Q9Y397 364 aa5.43□□□□□ -1.54
CDH1-211ENST00000567320 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 USP53Q70EK8 1073 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 TTC9BQ8N6N2 239 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 MICAL1Q8TDZ2 1067 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.42□□□□□ -1.54
CDH1-211ENST00000567320 KCTD13Q8WZ19 329 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 JAM3Q9BX67 310 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 ST7Q9NRC1 585 aa5.42□□□□□ -1.54
CDH1-211ENST00000567320 B4GALT3O60512 393 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 GJB6O95452 261 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 FSHBP01225 129 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 ZNF28P17035 718 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 GRIA2P42262 883 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 MLLT6P55198 1093 aaPredicted RBP5.41□□□□□ -1.54
CDH1-211ENST00000567320 GRIN1Q05586 938 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 MRM1Q6IN84 353 aaKnown RBP5.41□□□□□ -1.54
CDH1-211ENST00000567320 DENND5AQ6IQ26 1287 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 KBTBD2Q8IY47 623 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 DVL3Q92997 716 aaPredicted RBP5.41□□□□□ -1.54
CDH1-211ENST00000567320 WRNIP1Q96S55 665 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 IER2Q9BTL4 223 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 SMOC1Q9H4F8 434 aa5.41□□□□□ -1.54
CDH1-211ENST00000567320 BARX1Q9HBU1 254 aaPredicted RBP5.41□□□□□ -1.54
CDH1-211ENST00000567320 MATN3O15232 486 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 B4GALT4O60513 344 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 TADA3O75528 432 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 LRG1P02750 347 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 TNFRSF1AP19438 455 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 PPP2R2AP63151 447 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 PHF19Q5T6S3 580 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 VASNQ6EMK4 673 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 TRIM48Q8IWZ4 208 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 PIP4K2CQ8TBX8 421 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 SH3RF3Q8TEJ3 882 aaPredicted RBP5.4□□□□□ -1.54
CDH1-211ENST00000567320 EPN3Q9H201 632 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 DEF6Q9H4E7 631 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 ZNF408Q9H9D4 720 aa5.4□□□□□ -1.54
CDH1-211ENST00000567320 RBPJLQ9UBG7 517 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms