RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 ALG1Q9BT22 464 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 IFIH1Q9BYX4 1025 aaKnown RBP19.74■□□□□ 0.75
CLK3-217ENST00000566126 OSBPL7Q9BZF2 842 aa19.74■□□□□ 0.75
CLK3-217ENST00000566126 GSG1L2A8MUP6 293 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 IPO8O15397 1037 aaKnown RBP19.73■□□□□ 0.75
CLK3-217ENST00000566126 MMP1P03956 469 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 CALML3P27482 149 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 PSEN2P49810 448 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 ERC1Q8IUD2 1116 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 TMEM105Q8N8V8 129 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 CNTNAP3BQ96NU0 1288 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 CNTNAP3Q9BZ76 1288 aa19.73■□□□□ 0.75
CLK3-217ENST00000566126 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.73■□□□□ 0.753e-7■■□□□ 14.4
CLK3-217ENST00000566126 RSPH10B2B2RC85 870 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 HAS3O00219 553 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 ANP32CO43423 234 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 RSPH10BP0C881 870 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 CASTP20810 708 aaKnown RBP19.72■□□□□ 0.75
CLK3-217ENST00000566126 LY6KQ17RY6 165 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 RCSD1Q6JBY9 416 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 ADGRD2Q7Z7M1 963 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 NEDD1Q8NHV4 660 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
CLK3-217ENST00000566126 IL17RAQ96F46 866 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 STRBPQ96SI9 672 aaKnown RBP19.72■□□□□ 0.75
CLK3-217ENST00000566126 RANBP17Q9H2T7 1088 aaKnown RBP19.72■□□□□ 0.75
CLK3-217ENST00000566126 FRYLO94915 3013 aa19.72■□□□□ 0.75
CLK3-217ENST00000566126 KIAA1217Q5T5P2 1943 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 GLP2RO95838 553 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 DGLUCYQ7Z3D6 616 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 EFHBQ8N7U6 833 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 RHPN1Q8TCX5 695 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 CLEC4DQ8WXI8 215 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
CLK3-217ENST00000566126 ACACBO00763 2458 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 GH1P01241 217 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 THPOP40225 353 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 MFSD10Q14728 455 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 KIAA0753Q2KHM9 967 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 GIMAP6Q6P9H5 292 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 CHST3Q7LGC8 479 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 SEPT8Q92599 483 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 CLP1Q92989 425 aaKnown RBP19.7■□□□□ 0.74
CLK3-217ENST00000566126 BARX2Q9UMQ3 279 aaPredicted RBP19.7■□□□□ 0.74
CLK3-217ENST00000566126 CFAP47Q6ZTR5 3102 aa19.7■□□□□ 0.74
CLK3-217ENST00000566126 MYH7BA7E2Y1 1941 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 BAHCC1Q9P281 2608 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 F2P00734 622 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 DNAJB1P25685 340 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 RPS6P62753 249 aaKnown RBP19.69■□□□□ 0.74
CLK3-217ENST00000566126 DGKDQ16760 1214 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 MCTP2Q6DN12 878 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 RNF207Q6ZRF8 634 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 SERINC5Q86VE9 423 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 DNERQ8NFT8 737 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 KATNAL1Q9BW62 490 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 RC3H2Q9HBD1 1191 aaKnown RBP19.69■□□□□ 0.74
CLK3-217ENST00000566126 EPB41L4AQ9HCS5 686 aaPredicted RBP19.69■□□□□ 0.74
CLK3-217ENST00000566126 RWDD3Q9Y3V2 267 aa19.69■□□□□ 0.74
CLK3-217ENST00000566126 KIAA1671Q9BY89 1806 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 ZNF286BP0CG31 522 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 TSPY3P0CV98 308 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 TSPY8P0CW00 308 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 CEP85Q6P2H3 762 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 SUSD6Q92537 303 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 MPHOSPH6Q99547 160 aaKnown RBP19.68■□□□□ 0.74
CLK3-217ENST00000566126 ZNF287Q9HBT7 754 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 PLAGL2Q9UPG8 496 aa19.68■□□□□ 0.74
CLK3-217ENST00000566126 MYO10Q9HD67 2058 aa19.67■□□□□ 0.74
CLK3-217ENST00000566126 ATF7P17544 494 aaPredicted RBP19.67■□□□□ 0.74
CLK3-217ENST00000566126 TTBK2Q6IQ55 1244 aa19.67■□□□□ 0.74
CLK3-217ENST00000566126 HAUS7Q99871 368 aa19.67■□□□□ 0.74
CLK3-217ENST00000566126 CEP250Q9BV73 2442 aa19.67■□□□□ 0.74
CLK3-217ENST00000566126 ADGRA3Q8IWK6 1321 aa19.67■□□□□ 0.74
CLK3-217ENST00000566126 CHD6Q8TD26 2715 aa19.67■□□□□ 0.74
CLK3-217ENST00000566126 SLC16A2P36021 539 aa19.66■□□□□ 0.74
CLK3-217ENST00000566126 NRIP1P48552 1158 aa19.66■□□□□ 0.74
CLK3-217ENST00000566126 TFAP4Q01664 338 aa19.66■□□□□ 0.74
CLK3-217ENST00000566126 SEPT14Q6ZU15 432 aa19.66■□□□□ 0.74
CLK3-217ENST00000566126 CLASRPQ8N2M8 674 aaKnown RBP19.66■□□□□ 0.74
CLK3-217ENST00000566126 PPP2R3CQ969Q6 453 aa19.66■□□□□ 0.74
CLK3-217ENST00000566126 PLVAPQ9BX97 442 aa19.66■□□□□ 0.74
CLK3-217ENST00000566126 IFIT2P09913 472 aaKnown RBP19.65■□□□□ 0.74
CLK3-217ENST00000566126 DHX37Q8IY37 1157 aaKnown RBP19.65■□□□□ 0.74
CLK3-217ENST00000566126 ATP5JP18859 108 aa19.64■□□□□ 0.73
CLK3-217ENST00000566126 BTNL9Q6UXG8 535 aa19.64■□□□□ 0.73
CLK3-217ENST00000566126 RBM23Q86U06 439 aaKnown RBP19.64■□□□□ 0.73
CLK3-217ENST00000566126 SPPL3Q8TCT6 385 aa19.64■□□□□ 0.73
CLK3-217ENST00000566126 EMID1Q96A84 441 aaPredicted RBP19.64■□□□□ 0.73
CLK3-217ENST00000566126 MTMR7Q9Y216 660 aa19.64■□□□□ 0.73
CLK3-217ENST00000566126 PCDHGC5Q9Y5F6 944 aa19.64■□□□□ 0.73
CLK3-217ENST00000566126 B4DLN1 442 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 ITGB1P05556 798 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 CTSHP09668 335 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 MRPL12P52815 198 aaKnown RBP19.63■□□□□ 0.73
CLK3-217ENST00000566126 RBM10P98175 930 aaKnown RBP19.63■□□□□ 0.73
CLK3-217ENST00000566126 ZSCAN25Q6NSZ9 544 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 ZBTB33Q86T24 672 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 KREMEN2Q8NCW0 462 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 P2RX5Q93086 422 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms