RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 STEAP3Q658P3 488 aa6.94□□□□□ -1.3
CHD9-212ENST00000564641 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
CHD9-212ENST00000564641 MCF2L2Q86YR7 1114 aa6.94□□□□□ -1.3
CHD9-212ENST00000564641 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
CHD9-212ENST00000564641 MICAL1Q8TDZ2 1067 aa6.94□□□□□ -1.3
CHD9-212ENST00000564641 TOE1Q96GM8 510 aaKnown RBP6.94□□□□□ -1.3
CHD9-212ENST00000564641 DNAJA1P31689 397 aaKnown RBP6.93□□□□□ -1.3
CHD9-212ENST00000564641 CNR2P34972 360 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 PPP2R2AP63151 447 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 HSP90AA2PQ14568 343 aaPredicted RBP6.93□□□□□ -1.3
CHD9-212ENST00000564641 RGL3Q3MIN7 710 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 CYP4F22Q6NT55 531 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 RSPO2Q6UXX9 243 aaPredicted RBP6.93□□□□□ -1.3
CHD9-212ENST00000564641 FERMT3Q86UX7 667 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 FAM26EQ8N5C1 309 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 WRNIP1Q96S55 665 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 GPR27Q9NS67 375 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 CLDND1Q9NY35 253 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 DTLQ9NZJ0 730 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 PCDHB4Q9Y5E5 795 aa6.93□□□□□ -1.3
CHD9-212ENST00000564641 KRIT1O00522 736 aa6.92□□□□□ -1.3
CHD9-212ENST00000564641 TADA3O75528 432 aa6.92□□□□□ -1.3
CHD9-212ENST00000564641 DDR2Q16832 855 aa6.92□□□□□ -1.3
CHD9-212ENST00000564641 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
CHD9-212ENST00000564641 TRIM48Q8IWZ4 208 aa6.92□□□□□ -1.3
CHD9-212ENST00000564641 LGI4Q8N135 537 aa6.92□□□□□ -1.3
CHD9-212ENST00000564641 DDX1Q92499 740 aaKnown RBP6.92□□□□□ -1.3
CHD9-212ENST00000564641 A0A1W2PQU0 124 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 ZNF827Q17R98 1081 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 PRR31Q5SQ13 230 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 ANKS3Q6ZW76 656 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 ST13P5Q8NFI4 369 aaPredicted RBP6.91□□□□□ -1.3
CHD9-212ENST00000564641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD9-212ENST00000564641 CLIC6Q96NY7 704 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 TMEM209Q96SK2 561 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 SMOC1Q9H4F8 434 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 NUB1Q9Y5A7 615 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 DUSP10Q9Y6W6 482 aa6.91□□□□□ -1.3
CHD9-212ENST00000564641 TCRBV5S2A0A599 114 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 MROH6A6NGR9 719 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 LCP1P13796 627 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 STAT5AP42229 794 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 SURF1Q15526 300 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 LCORQ96JN0 433 aaPredicted RBP6.9□□□□□ -1.3
CHD9-212ENST00000564641 ZFYVE21Q9BQ24 234 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 IER2Q9BTL4 223 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 MYOTQ9UBF9 498 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.3
CHD9-212ENST00000564641 NISCHQ9Y2I1 1504 aa6.9□□□□□ -1.31
CHD9-212ENST00000564641 PLATP00750 562 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 ITGB3P05106 788 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 GRIA2P42262 883 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 NFKB2Q00653 900 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 TEPPQ6URK8 271 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 TXNDC5Q8NBS9 432 aaKnown RBP6.89□□□□□ -1.31
CHD9-212ENST00000564641 DCAF4Q8WV16 495 aa6.89□□□□□ -1.31
CHD9-212ENST00000564641 HNRNPLLQ8WVV9 542 aaKnown RBP6.89□□□□□ -1.31
CHD9-212ENST00000564641 ZNF669Q96BR6 464 aaPredicted RBP6.89□□□□□ -1.31
CHD9-212ENST00000564641 FGFR1P11362 822 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 ADAM9Q13443 819 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 MCTP2Q6DN12 878 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 HHIPL2Q6UWX4 724 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 LRRC47Q8N1G4 583 aaKnown RBP6.88□□□□□ -1.31
CHD9-212ENST00000564641 CELF2-AS1Q8N7Q2 184 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 ARRDC4Q8NCT1 418 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 TTLL11Q8NHH1 800 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 AARSD1Q9BTE6 412 aaKnown RBP6.88□□□□□ -1.31
CHD9-212ENST00000564641 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 L2HGDHQ9H9P8 463 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 SLC6A20Q9NP91 592 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 ST7Q9NRC1 585 aa6.88□□□□□ -1.31
CHD9-212ENST00000564641 DDX3XO00571 662 aaKnown RBP eCLIP6.87□□□□□ -1.31
CHD9-212ENST00000564641 KLF4O43474 513 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 DLX3O60479 287 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 ZNF28P17035 718 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
CHD9-212ENST00000564641 KIZQ2M2Z5 673 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 SAMD11Q96NU1 681 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 SYT3Q9BQG1 590 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 JAG2Q9Y219 1238 aa6.87□□□□□ -1.31
CHD9-212ENST00000564641 CYP1A1P04798 512 aaPredicted RBP6.86□□□□□ -1.31
CHD9-212ENST00000564641 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 RAB33AQ14088 237 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 ZXDCQ2QGD7 858 aaPredicted RBP6.86□□□□□ -1.31
CHD9-212ENST00000564641 USP53Q70EK8 1073 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 STK32CQ86UX6 486 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 RBM15Q96T37 977 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD9-212ENST00000564641 GPR20Q99678 358 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 TMEM168Q9H0V1 697 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 SMPD4Q9NXE4 827 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 ASH2LQ9UBL3 628 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms