RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 MSCO60682 206 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 C8BP07358 591 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 ZC3H6P61129 1189 aaKnown RBP4.89□□□□□ -1.63
CHD9-211ENST00000564600 RGL3Q3MIN7 710 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 YOD1Q5VVQ6 348 aaPredicted RBP4.89□□□□□ -1.63
CHD9-211ENST00000564600 MCTP2Q6DN12 878 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 CABP7Q86V35 215 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 CHST13Q8NET6 341 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 DIO2Q92813 273 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 GORASP1Q9BQQ3 440 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 IER2Q9BTL4 223 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 ARHGEF4Q9NR80 690 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 NTMQ9P121 344 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 CNOT11Q9UKZ1 510 aaKnown RBP4.89□□□□□ -1.63
CHD9-211ENST00000564600 PCDHA2Q9Y5H9 948 aa4.89□□□□□ -1.63
CHD9-211ENST00000564600 MEFVO15553 781 aaPredicted RBP4.88□□□□□ -1.63
CHD9-211ENST00000564600 PLATP00750 562 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 CDSNQ15517 529 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 TESK1Q15569 626 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 E4F1Q66K89 784 aaPredicted RBP4.88□□□□□ -1.63
CHD9-211ENST00000564600 SPATC1Q76KD6 591 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 CEP68Q76N32 757 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 PALM2Q8IXS6 379 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 Q8N1Y9 231 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 PEX11GQ96HA9 241 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 MENTQ9BUN1 341 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 SSBP3Q9BWW4 388 aaPredicted RBP4.88□□□□□ -1.63
CHD9-211ENST00000564600 CDIP1Q9H305 208 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 PPARGC1AQ9UBK2 798 aaKnown RBP4.88□□□□□ -1.63
CHD9-211ENST00000564600 R3HCC1Q9Y3T6 440 aaKnown RBP4.88□□□□□ -1.63
CHD9-211ENST00000564600 TIMM13Q9Y5L4 95 aaPredicted RBP4.88□□□□□ -1.63
CHD9-211ENST00000564600 ZNF536O15090 1300 aa4.88□□□□□ -1.63
CHD9-211ENST00000564600 BLACEA4D250 179 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 TACR2P21452 398 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 RPL11P62913 178 aaKnown RBP4.87□□□□□ -1.63
CHD9-211ENST00000564600 ICAM4Q14773 271 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 NTRK3Q16288 839 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 CRB2Q5IJ48 1285 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 ACBD5Q5T8D3 534 aaPredicted RBP4.87□□□□□ -1.63
CHD9-211ENST00000564600 OSBP2Q969R2 916 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 EPN3Q9H201 632 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 ING1Q9UK53 422 aaPredicted RBP4.87□□□□□ -1.63
CHD9-211ENST00000564600 MSRB2Q9Y3D2 182 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 NPFFR2Q9Y5X5 522 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 X6R8D5 127 aa4.87□□□□□ -1.63
CHD9-211ENST00000564600 CPP00450 1065 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 LTBRP36941 435 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 CACNB2Q08289 660 aaPredicted RBP4.86□□□□□ -1.63
CHD9-211ENST00000564600 IQCEQ6IPM2 695 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 ZNF585AQ6P3V2 769 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 KCNT2Q6UVM3 1135 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 TTLL7Q6ZT98 887 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 TRMT2BQ96GJ1 504 aaKnown RBP4.86□□□□□ -1.63
CHD9-211ENST00000564600 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 SAMD11Q96NU1 681 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 TANGO6Q9C0B7 1094 aa4.86□□□□□ -1.63
CHD9-211ENST00000564600 CCDC85CA6NKD9 419 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 C1QTNF3-AMACRE9PGA6 284 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 PRODHO43272 600 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 SMARCA5O60264 1052 aaPredicted RBP4.85□□□□□ -1.63
CHD9-211ENST00000564600 STK10O94804 968 aaKnown RBP4.85□□□□□ -1.63
CHD9-211ENST00000564600 ZBTB7AO95365 584 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 GDF5P43026 501 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 MAP4K2Q12851 820 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 KCNAB2Q13303 367 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 SLC9A5Q14940 896 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 FOXB2Q5VYV0 432 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 USP53Q70EK8 1073 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 MILR1Q7Z6M3 343 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 DCP2Q8IU60 420 aaKnown RBP4.85□□□□□ -1.63
CHD9-211ENST00000564600 CPA5Q8WXQ8 436 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 CHAMP1Q96JM3 812 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 JAM3Q9BX67 310 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 C1QTNF3Q9BXJ4 246 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 NUDT5Q9UKK9 219 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 ASXL2Q76L83 1435 aa4.85□□□□□ -1.63
CHD9-211ENST00000564600 AGRPO00253 132 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 DDX3XO00571 662 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD9-211ENST00000564600 ADCY3O60266 1144 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 DIAPH1O60610 1272 aaKnown RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 AMHP03971 560 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 PABPC1P11940 636 aaKnown RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 STAT5AP42229 794 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 KLF10Q13118 480 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 LSAMPQ13449 338 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 HSP90AA2PQ14568 343 aaPredicted RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 MROH9Q5TGP6 573 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 RIOX2Q8IUF8 465 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 RBM12BQ8IXT5 1001 aaKnown RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 ARRDC4Q8NCT1 418 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 ST13P5Q8NFI4 369 aaPredicted RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 KCTD13Q8WZ19 329 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 DVL3Q92997 716 aaPredicted RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 SGSM3Q96HU1 749 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 PTPN18Q99952 460 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 AARSD1Q9BTE6 412 aaKnown RBP4.84□□□□□ -1.63
CHD9-211ENST00000564600 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 TRIM55Q9BYV6 548 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 CLDND1Q9NY35 253 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms