RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 WDR11Q9BZH6 1224 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 HIPK3Q9H422 1215 aa19.05■□□□□ 0.64
CDT1-202ENST00000562747 YBX2Q9Y2T7 364 aaKnown RBP19.05■□□□□ 0.64
CDT1-202ENST00000562747 V9GY48 417 aaPredicted RBP19.05■□□□□ 0.64
CDT1-202ENST00000562747 MEIS2O14770 477 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 NKRFO15226 690 aaKnown RBP eCLIP19.04■□□□□ 0.64
CDT1-202ENST00000562747 EIF3JO75822 258 aaKnown RBP19.04■□□□□ 0.64
CDT1-202ENST00000562747 ITGA7Q13683 1181 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 PGM5Q15124 567 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 WWC2Q6AWC2 1192 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 PPP1R18Q6NYC8 613 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 FCHSD1Q86WN1 690 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 SMARCC2Q8TAQ2 1214 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 GPKOWQ92917 476 aaPredicted RBP eCLIP19.04■□□□□ 0.64
CDT1-202ENST00000562747 VWCEQ96DN2 955 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 GAS2L1Q99501 681 aaPredicted RBP19.04■□□□□ 0.64
CDT1-202ENST00000562747 NOC4LQ9BVI4 516 aaKnown RBP19.04■□□□□ 0.64
CDT1-202ENST00000562747 TRPV6Q9H1D0 765 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 WNT8AQ9H1J5 351 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 NKX2-4Q9H2Z4 354 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 PSTPIP2Q9H939 334 aa19.04■□□□□ 0.64
CDT1-202ENST00000562747 FRMPD4Q14CM0 1322 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 CHD7Q9P2D1 2997 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 B4GALT4O60513 344 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 CCL23P55773 120 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 TTLL4Q14679 1199 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 ANKRD1Q15327 319 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 NTRK3Q16288 839 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 AP5M1Q9H0R1 490 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 BARHL2Q9NY43 387 aa19.03■□□□□ 0.64
CDT1-202ENST00000562747 DYNC1LI2O43237 492 aaPredicted RBP19.02■□□□□ 0.64
CDT1-202ENST00000562747 PRPF3O43395 683 aaKnown RBP19.02■□□□□ 0.64
CDT1-202ENST00000562747 CABYRO75952 493 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 IFNAR1P17181 557 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 CCND2P30279 289 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 NAPAP54920 295 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 CCT2P78371 535 aaKnown RBP19.02■□□□□ 0.64
CDT1-202ENST00000562747 PFKFB3Q16875 520 aaPredicted RBP19.02■□□□□ 0.64
CDT1-202ENST00000562747 USP17L6PQ6QN14 398 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 OTOP2Q7RTS6 562 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 VSIG10LQ86VR7 867 aa19.02■□□□□ 0.64
CDT1-202ENST00000562747 RNF26Q9BY78 433 aaPredicted RBP19.02■□□□□ 0.64
CDT1-202ENST00000562747 KIAA1217Q5T5P2 1943 aa19.02■□□□□ 0.63
CDT1-202ENST00000562747 SCN5AQ14524 2016 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 STXBP3O00186 592 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 FGBP02675 491 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 MYCLP12524 364 aaPredicted RBP19.01■□□□□ 0.63
CDT1-202ENST00000562747 SCG2P13521 617 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 AKAP17AQ02040 695 aaKnown RBP19.01■□□□□ 0.63
CDT1-202ENST00000562747 RAB30Q15771 203 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 SEPT14Q6ZU15 432 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 GLT8D2Q9H1C3 349 aa19.01■□□□□ 0.63
CDT1-202ENST00000562747 NCOA5Q9HCD5 579 aaKnown RBP19.01■□□□□ 0.63
CDT1-202ENST00000562747 TNFRSF10AO00220 468 aa19■□□□□ 0.63
CDT1-202ENST00000562747 ZEB2O60315 1214 aa19■□□□□ 0.63
CDT1-202ENST00000562747 STAM2O75886 525 aa19■□□□□ 0.63
CDT1-202ENST00000562747 TXNP10599 105 aaKnown RBP19■□□□□ 0.63
CDT1-202ENST00000562747 RABGGTBP53611 331 aa19■□□□□ 0.63
CDT1-202ENST00000562747 CCDC85BQ15834 202 aaPredicted RBP19■□□□□ 0.63
CDT1-202ENST00000562747 TYW1BQ6NUM6 668 aa19■□□□□ 0.63
CDT1-202ENST00000562747 CCDC62Q6P9F0 684 aa19■□□□□ 0.63
CDT1-202ENST00000562747 IL31RAQ8NI17 732 aa19■□□□□ 0.63
CDT1-202ENST00000562747 PHKBQ93100 1093 aa19■□□□□ 0.63
CDT1-202ENST00000562747 SCLYQ96I15 445 aa19■□□□□ 0.63
CDT1-202ENST00000562747 LARP6Q9BRS8 491 aaKnown RBP19■□□□□ 0.63
CDT1-202ENST00000562747 RIC8AQ9NPQ8 531 aa19■□□□□ 0.63
CDT1-202ENST00000562747 MSRAQ9UJ68 235 aa19■□□□□ 0.63
CDT1-202ENST00000562747 REV3LO60673 3130 aa19■□□□□ 0.63
CDT1-202ENST00000562747 MYO9BQ13459 2157 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 CPLX1O14810 134 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 ARIH2O95376 493 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 MYOGP15173 224 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 AK2P54819 239 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 PKN1Q16512 942 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 XRRA1Q6P2D8 792 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 KCNV1Q6PIU1 500 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 CPLX2Q6PUV4 134 aaKnown RBP18.99■□□□□ 0.63
CDT1-202ENST00000562747 OR6J1Q8NGC5 347 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 CCDC12Q8WUD4 166 aaPredicted RBP18.99■□□□□ 0.63
CDT1-202ENST00000562747 THEGQ9P2T0 379 aa18.99■□□□□ 0.63
CDT1-202ENST00000562747 SMCO2A6NFE2 343 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 SPDYE3A6NKU9 549 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 IGFBP4P22692 258 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 CPT1AP50416 773 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 ADCY7P51828 1080 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 NEK4P51957 841 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 STK3Q13188 491 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 UBE2SQ16763 222 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 BRDTQ58F21 947 aaPredicted RBP18.98■□□□□ 0.63
CDT1-202ENST00000562747 PCNX4Q63HM2 1172 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 TRIM22Q8IYM9 498 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 SLC26A6Q9BXS9 759 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 SLKQ9H2G2 1235 aaPredicted RBP18.98■□□□□ 0.63
CDT1-202ENST00000562747 EHMT1Q9H9B1 1298 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 TRMT13Q9NUP7 481 aaKnown RBP18.98■□□□□ 0.63
CDT1-202ENST00000562747 DDX41Q9UJV9 622 aaKnown RBP18.98■□□□□ 0.63
CDT1-202ENST00000562747 TPCN1Q9ULQ1 816 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 MRVI1Q9Y6F6 885 aa18.98■□□□□ 0.63
CDT1-202ENST00000562747 ESYT2A0FGR8 921 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms