RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RARS2Q5T160 578 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 H2AFVQ71UI9 128 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 ZNF555Q8NEP9 628 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 ASZ1Q8WWH4 475 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 SCG3Q8WXD2 468 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 OTULINQ96BN8 352 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 YIPF3Q9GZM5 350 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 SLC27A2O14975 620 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 ARIH2O95376 493 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 WDR75Q8IWA0 830 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 REXO1Q8N1G1 1221 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 ST13P5Q8NFI4 369 aaPredicted RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 MLXIPQ9HAP2 919 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 TBK1Q9UHD2 729 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 MAGED2Q9UNF1 606 aaPredicted RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 GJA3Q9Y6H8 435 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 ABCD1P33897 745 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 SNX25Q9H3E2 840 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 IMPDH2P12268 514 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 PAPOLAP51003 745 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 EIF6P56537 245 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 DMC1Q14565 340 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 CEP85Q6P2H3 762 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 STOML1Q9UBI4 398 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 PTPROQ16827 1216 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 CNBD2Q96M20 576 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 NSFL1CQ9UNZ2 370 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 RNF103-CHMP3A0A140T963 221 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 UBE3AQ05086 875 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 ANGPT1Q15389 498 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 ARMCX5Q6P1M9 558 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 RSRC2Q7L4I2 434 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 DZIP3Q86Y13 1208 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 CYP4F22Q6NT55 531 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 ASCC2Q9H1I8 757 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 KLHL31Q9H511 634 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 SLC24A3Q9HC58 644 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 hCG_2014768A0A024R1R8 64 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 NAA35Q5VZE5 725 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 C19orf60Q96EN9 201 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 RASSF7Q02833 373 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 FAM47CQ5HY64 1035 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 HIBCHQ6NVY1 386 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 RTCBQ9Y3I0 505 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 HNRNPRO43390 633 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 CFBP00751 764 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 BASP1P80723 227 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 EHHADHQ08426 723 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 FAM178BQ8IXR5 827 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 IRS4O14654 1257 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 POLGP54098 1239 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 CENPUQ71F23 418 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 DIS3L2Q8IYB7 885 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 KIF2CQ99661 725 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 TBC1D23Q9NUY8 699 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 ANKRD36BQ8N2N9 1353 aa14.91□□□□□ -0.02
CSPG4P12-202ENST00000559989 CHMLP26374 656 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 TMED10P49755 219 aaKnown RBP14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 ARHGEF37A1IGU5 675 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 NLRP4Q96MN2 994 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 KPNA7A9QM74 516 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 RHOBTB1O94844 696 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 BRD1O95696 1058 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 GUCA1CO95843 209 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 BRD2P25440 801 aaKnown RBP14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 NSUN2Q08J23 767 aaKnown RBP eCLIP14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 NME9Q86XW9 330 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 PKD2L2Q9NZM6 624 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 G3BP2Q9UN86 482 aaKnown RBP14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 EPN1Q9Y6I3 576 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 SYNDIG1LA6NDD5 238 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 CCDC142Q17RM4 750 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 DESI2Q9BSY9 194 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 SEL1LQ9UBV2 794 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 PLEKHG3A1L390 1219 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 C10orf88Q9H8K7 445 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 ZMYND8Q9ULU4 1186 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 FAM170AA1A519 330 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 ADCY3O60266 1144 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 PRDM1O75626 825 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 FAM160B1Q5W0V3 765 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 PYROXD1Q8WU10 500 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 DONSONQ9NYP3 566 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 LZTS1Q9Y250 596 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 MOCS3O95396 460 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 KRT1P04264 644 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 HIPK4Q8NE63 616 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 FMO2Q99518 471 aa14.9□□□□□ -0.02
CSPG4P12-202ENST00000559989 CCDC151A5D8V7 595 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 NR1D1P20393 614 aa14.89□□□□□ -0.03
CSPG4P12-202ENST00000559989 TRAPPC10P48553 1259 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms