RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 DSCC1Q9BVC3 393 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 HDAC8Q9BY41 377 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 ASCC2Q9H1I8 757 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-209ENST00000558861 CHST7Q9NS84 486 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
LRRC28-209ENST00000558861 BRWD3Q6RI45 1802 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 A0A1W2PQU0 124 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 H0Y8X5 98 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 CYP27B1O15528 508 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 ADCY3O60266 1144 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 SRFP11831 508 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 CTSKP43235 329 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 CLEC16AQ2KHT3 1053 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 SULT6B1Q6IMI4 303 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 SLC51AQ86UW1 340 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 BVESQ8NE79 360 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 NETO1Q8TDF5 533 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 SYTL5Q8TDW5 730 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-209ENST00000558861 PLEKHF1Q96S99 279 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 SPATA9Q9BWV2 254 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 PRR13Q9NZ81 148 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 PKD1L3Q7Z443 1732 aa7.88□□□□□ -1.15
LRRC28-209ENST00000558861 IQCA1LA6NCM1 817 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 AGRPO00253 132 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 ANP32CO43423 234 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 ITGB7P26010 798 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 CLCN7P51798 805 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 IFI16Q16666 785 aaKnown RBP7.87□□□□□ -1.15
LRRC28-209ENST00000558861 C2orf27AQ580R0 203 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 SDE2Q6IQ49 451 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 CRTC3Q6UUV7 619 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 KRT27Q7Z3Y8 459 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 LRRC47Q8N1G4 583 aaKnown RBP7.87□□□□□ -1.15
LRRC28-209ENST00000558861 ARHGEF39Q8N4T4 335 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
LRRC28-209ENST00000558861 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
LRRC28-209ENST00000558861 PHACTR3Q96KR7 559 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 CFAP53Q96M91 514 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 ARHGEF4Q9NR80 690 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 GPATCH2Q9NW75 528 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 ZSWIM5Q9P217 1185 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 AKT3Q9Y243 479 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 EMC9Q9Y3B6 208 aa7.87□□□□□ -1.15
LRRC28-209ENST00000558861 A0A087WZG4 1122 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 KCNH1O95259 989 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 HMOX1P09601 288 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 FAM153BP0C7A2 387 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 GRIA2P42262 883 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 PPP2R2AP63151 447 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 SQSTM1Q13501 440 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 DDB1Q16531 1140 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 TRIM59Q8IWR1 403 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 JMYQ8N9B5 988 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
LRRC28-209ENST00000558861 THAP3Q8WTV1 239 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-209ENST00000558861 RAPGEF4Q8WZA2 1011 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 SGSM3Q96HU1 749 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 MRGPRX3Q96LB0 322 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 SEMA3GQ9NS98 782 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 PTCH2Q9Y6C5 1203 aa7.86□□□□□ -1.15
LRRC28-209ENST00000558861 PITPNM2Q9BZ72 1349 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 EXOC5O00471 708 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
LRRC28-209ENST00000558861 MSMPQ1L6U9 139 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 YOD1Q5VVQ6 348 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-209ENST00000558861 PTF1AQ7RTS3 328 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 TSPYL5Q86VY4 417 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-209ENST00000558861 DAGLBQ8NCG7 672 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 BTN2A2Q8WVV5 523 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 UBE2FQ969M7 185 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 TCTN2Q96GX1 697 aa7.85□□□□□ -1.15
LRRC28-209ENST00000558861 TRIT1Q9H3H1 467 aaKnown RBP7.85□□□□□ -1.15
LRRC28-209ENST00000558861 KDM6AO15550 1401 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-209ENST00000558861 ADAMTS7Q9UKP4 1686 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 TMEM265A0A087WTH1 108 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 ESYT3A0FGR9 886 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 CCER2I3L3R5 266 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 U2AF1L5P0DN76 240 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 PHKG2P15735 406 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 TPP2P29144 1249 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 PRKAR2BP31323 418 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 U2AF1Q01081 240 aaKnown RBP eCLIP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 MTHFSDQ2M296 383 aaKnown RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 GAB4Q2WGN9 574 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 FOXB2Q5VYV0 432 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 POMZP3Q6PJE2 187 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 ZNF655Q8N720 491 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 ZBTB38Q8NAP3 1195 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 ATP13A1Q9HD20 1204 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 NUDCQ9Y266 331 aa7.84□□□□□ -1.15
LRRC28-209ENST00000558861 DIS3Q9Y2L1 958 aaKnown RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 GPR55Q9Y2T6 319 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 SF3B6Q9Y3B4 125 aaKnown RBP7.84□□□□□ -1.15
LRRC28-209ENST00000558861 PCDH11XQ9BZA7 1347 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 PCDH11YQ9BZA8 1340 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 VAMP4O75379 141 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 GSNP06396 782 aa7.83□□□□□ -1.16
LRRC28-209ENST00000558861 DPY19L1Q2PZI1 675 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms