RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZNF804AQ7Z570 1209 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 RNF168Q8IYW5 571 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CSGALNACT2Q8N6G5 542 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 EIF1ADQ8N9N8 165 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PRPF38AQ8NAV1 312 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 NEK11Q8NG66 645 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CAGE1Q8TC20 777 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 SYN2Q92777 582 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 RRP36Q96EU6 259 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CCDC42Q96M95 316 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PCMTD1Q96MG8 357 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PHF12Q96QT6 1004 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 UIMC1Q96RL1 719 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 ERGIC2Q96RQ1 377 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 WDR24Q96S15 920 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 RUFY1Q96T51 708 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 C7orf25Q9BPX7 421 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 MYL10Q9BUA6 226 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 RETREG1Q9H6L5 497 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 GJB4Q9NTQ9 266 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 KBTBD4Q9NVX7 518 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 QPCTLQ9NXS2 382 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 BARHL2Q9NY43 387 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 SPATA7Q9P0W8 599 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 ADAM21Q9UKJ8 722 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 L1RE1Q9UN81 338 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PPME1Q9Y570 386 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 C10orf71Q711Q0 1435 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 ATP8B3O60423 1300 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CNTNAP4Q9C0A0 1308 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 KDM3AQ9Y4C1 1321 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 SOWAHDA6NJG2 315 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ENO4A6NNW6 628 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 USP17L12C9JPN9 530 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 USP17L21D6R901 530 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CES2O00748 559 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 PPFIA3O75145 1194 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 KRT38O76015 456 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 LDHBP07195 334 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 OR52Z1P0C646 297 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 MSL3P1P0C860 447 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TSPY3P0CV98 308 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TSPY8P0CW00 308 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 FERP16591 822 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TNFRSF8P28908 595 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 HNRNPH3P31942 346 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 GUCY1A2P33402 732 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 MCM7P33993 719 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 MTIF2P46199 727 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 GCLCP48506 637 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 RAB27AP51159 221 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 VAV2P52735 878 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 USP14P54578 494 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 SIK1P57059 783 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 PPP4CP60510 307 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 RPS8P62241 208 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ROR2Q01974 943 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 IFFO1Q0D2I5 559 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 NAA30Q147X3 362 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 KARSQ15046 597 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 MFSD4BQ5TF39 518 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 NUGGCQ68CJ6 796 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 EMBQ6PCB8 327 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 RAD9BQ6WBX8 426 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 BARGINQ6ZT62 677 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 PIK3AP1Q6ZUJ8 805 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 C15orf52Q6ZUT6 534 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 B4GALNT4Q76KP1 1039 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 SV2BQ7L1I2 683 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TRAPPC11Q7Z392 1133 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ZNF572Q7Z3I7 529 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CABP7Q86V35 215 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CEP57Q86XR8 500 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ZSCAN29Q8IWY8 852 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CCDC65Q8IXS2 484 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TRMT44Q8IYL2 757 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 SLC35F6Q8N357 371 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 PNMA1Q8ND90 353 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ERMNQ8TAM6 284 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 CPLX3Q8WVH0 158 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 EZH1Q92800 747 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 DDX17Q92841 729 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 P2RX5Q93086 422 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 SYTL4Q96C24 671 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 NSUN4Q96CB9 384 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 EPSTI1Q96J88 318 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ANKRD27Q96NW4 1050 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 ZKSCAN3Q9BRR0 538 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TUBGCP2Q9BSJ2 902 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 NT5C3AQ9H0P0 336 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 VPS16Q9H269 839 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 DCP1AQ9NPI6 582 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 FAM184BQ9ULE4 1060 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 TPX2Q9ULW0 747 aaKnown RBP6.05□□□□□ -1.44
GABPB1-207ENST00000558335 SUGT1Q9Y2Z0 365 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 GMEB1Q9Y692 573 aa6.05□□□□□ -1.44
GABPB1-207ENST00000558335 BZW2Q9Y6E2 419 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms