RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 MYH15Q9Y2K3 1946 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 A0A087X0B3 334 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 TMEM232C9JQI7 657 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 H7C1D1 291 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 hCG_1984214I3L0E3 225 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 ERVH48-1M5A8F1 160 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 RAD21O60216 631 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 BMP15O95972 392 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 CCDC192P0DO97 292 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 BMP3P12645 472 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 GNA11P29992 359 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 MCM7P33993 719 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 RAB15P59190 212 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 MCCD1P59942 119 aaPredicted RBP8.39□□□□□ -1.07
SPG11-204ENST00000557866 CDC37Q16543 378 aaPredicted RBP8.39□□□□□ -1.07
SPG11-204ENST00000557866 INF2Q27J81 1249 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 LONRF3Q496Y0 759 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 ANGEL2Q5VTE6 544 aaKnown RBP8.39□□□□□ -1.07
SPG11-204ENST00000557866 PRAMEF18Q5VWM3 479 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 JAKMIP3Q5VZ66 844 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 SPICE1Q8N0Z3 855 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 GPC2Q8N158 579 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 ZNF713Q8N859 430 aaPredicted RBP8.39□□□□□ -1.07
SPG11-204ENST00000557866 EPSTI1Q96J88 318 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 TIGD1Q96MW7 591 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 VCPKMTQ9H867 229 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 RIC8AQ9NPQ8 531 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 TMPRSS4Q9NRS4 437 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
SPG11-204ENST00000557866 KCNH3Q9ULD8 1083 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 UTRNP46939 3433 aa8.39□□□□□ -1.07
SPG11-204ENST00000557866 FOXN1O15353 648 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 DDNO94850 711 aaPredicted RBP8.38□□□□□ -1.07
SPG11-204ENST00000557866 ASNSP08243 561 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 FBXO45P0C2W1 286 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 INPP5BP32019 993 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 ADCY7P51828 1080 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 TNFAIP1Q13829 316 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 NONOQ15233 471 aaKnown RBP eCLIP8.38□□□□□ -1.07
SPG11-204ENST00000557866 UBE2SQ16763 222 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 ANO6Q4KMQ2 910 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 FAM83BQ5T0W9 1011 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
SPG11-204ENST00000557866 ZNF592Q92610 1267 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 FERMT2Q96AC1 680 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 P2RX7Q99572 595 aaKnown RBP8.38□□□□□ -1.07
SPG11-204ENST00000557866 SDF4Q9BRK5 362 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 PRR12Q9ULL5 1215 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
SPG11-204ENST00000557866 VWA3AA6NCI4 1184 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 POLR2DO15514 142 aaKnown RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 AP5Z1O43299 807 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 CTNND1O60716 968 aaKnown RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 VSIG8P0DPA2 414 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 RELBQ01201 579 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 ZYXQ15942 572 aaKnown RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 LETM2Q2VYF4 491 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 C9orf131Q5VYM1 1079 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 SASS6Q6UVJ0 657 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 C11orf57Q6ZUT1 292 aaPredicted RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 APOBEC3FQ8IUX4 373 aaKnown RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 ELOA2Q8IYF1 753 aaPredicted RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 REXO1Q8N1G1 1221 aaKnown RBP8.37□□□□□ -1.07
SPG11-204ENST00000557866 TBCKQ8TEA7 893 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 PPP1R9BQ96SB3 815 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 DNAJC25Q9H1X3 360 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 PSTPIP2Q9H939 334 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 CBX8Q9HC52 389 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 FAM13BQ9NYF5 915 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 GGA3Q9NZ52 723 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 RNF181Q9P0P0 153 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 PCDHA1Q9Y5I3 950 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 ARFGEF1Q9Y6D6 1849 aa8.37□□□□□ -1.07
SPG11-204ENST00000557866 SRCAPQ6ZRS2 3230 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 FAM181BA6NEQ2 426 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L15C9J2P7 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L13C9JLJ4 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L11C9JVI0 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L18D6R9N7 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L22D6RA61 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L17D6RBQ6 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L19D6RCP7 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L20D6RJB6 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 OPLAHO14841 1288 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 PLA2G6O60733 806 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 LILRA1O75019 489 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 ADH1AP07327 375 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 MRPL12P52815 198 aaKnown RBP8.36□□□□□ -1.07
SPG11-204ENST00000557866 USP17L24Q0WX57 530 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 NR1H3Q13133 447 aa8.36□□□□□ -1.07
SPG11-204ENST00000557866 PNOCQ13519 176 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms