RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
NEK9-210ENST00000557026 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
NEK9-210ENST00000557026 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 HOMEZQ8IX15 550 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 RAD17O75943 681 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 AFPP02771 609 aaKnown RBP13.01□□□□□ -0.33
NEK9-210ENST00000557026 SFSWAPQ12872 951 aaKnown RBP13.01□□□□□ -0.33
NEK9-210ENST00000557026 KRT39Q6A163 491 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 LPAR1Q92633 364 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 RGS12O14924 1447 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
NEK9-210ENST00000557026 DSTYKQ6XUX3 929 aa13□□□□□ -0.33
NEK9-210ENST00000557026 SDR42E1Q8WUS8 393 aa13□□□□□ -0.33
NEK9-210ENST00000557026 ATP6V0A4Q9HBG4 840 aa13□□□□□ -0.33
NEK9-210ENST00000557026 BAG5Q9UL15 447 aa13□□□□□ -0.33
NEK9-210ENST00000557026 FCER1AP12319 257 aa13□□□□□ -0.33
NEK9-210ENST00000557026 KRT15P19012 456 aa13□□□□□ -0.33
NEK9-210ENST00000557026 MCM6Q14566 821 aa13□□□□□ -0.33
NEK9-210ENST00000557026 KARSQ15046 597 aaKnown RBP13□□□□□ -0.33
NEK9-210ENST00000557026 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
NEK9-210ENST00000557026 BEST2Q8NFU1 509 aa13□□□□□ -0.33
NEK9-210ENST00000557026 SLC38A10Q9HBR0 1119 aa13□□□□□ -0.33
NEK9-210ENST00000557026 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
NEK9-210ENST00000557026 TRAPPC3O43617 180 aa13□□□□□ -0.33
NEK9-210ENST00000557026 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
NEK9-210ENST00000557026 LRRC63Q05C16 580 aa13□□□□□ -0.33
NEK9-210ENST00000557026 BARGINQ6ZT62 677 aa13□□□□□ -0.33
NEK9-210ENST00000557026 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
NEK9-210ENST00000557026 SPATS2Q86XZ4 545 aaKnown RBP13□□□□□ -0.33
NEK9-210ENST00000557026 FAM186BQ8IYM0 893 aa13□□□□□ -0.33
NEK9-210ENST00000557026 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
NEK9-210ENST00000557026 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
NEK9-210ENST00000557026 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
NEK9-210ENST00000557026 ZNF75DP51815 510 aa13□□□□□ -0.33
NEK9-210ENST00000557026 ATP11AP98196 1134 aa13□□□□□ -0.33
NEK9-210ENST00000557026 ITKQ08881 620 aa13□□□□□ -0.33
NEK9-210ENST00000557026 LRRC24Q50LG9 513 aa13□□□□□ -0.33
NEK9-210ENST00000557026 PPM1KQ8N3J5 372 aa13□□□□□ -0.33
NEK9-210ENST00000557026 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
NEK9-210ENST00000557026 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
NEK9-210ENST00000557026 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 HSP90AA4PQ58FG1 418 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 IPO5O00410 1097 aaKnown RBP12.99□□□□□ -0.33
NEK9-210ENST00000557026 XRRA1Q6P2D8 792 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 APOA5Q6Q788 366 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 ZNF212Q9UDV6 495 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 RAD51Q06609 339 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 VEPH1Q14D04 833 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 ALX1Q15699 326 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 TXNRD1Q16881 649 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 SAMD3Q8N6K7 520 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 ANKFY1Q9P2R3 1169 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
NEK9-210ENST00000557026 ECE2O60344 883 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 PFKFB1P16118 471 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
NEK9-210ENST00000557026 CASQ2O14958 399 aaPredicted RBP12.98□□□□□ -0.33
NEK9-210ENST00000557026 ENTPD3O75355 529 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 SLC25A27O95847 323 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 CDK8P49336 464 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 ZNF445P59923 1031 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 RPUSD2Q8IZ73 545 aaKnown RBP12.98□□□□□ -0.33
NEK9-210ENST00000557026 NME8Q8N427 588 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 ACAP3Q96P50 834 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 MYL10Q9BUA6 226 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
NEK9-210ENST00000557026 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 K7ERI5 159 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 CCDC15Q0P6D6 951 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 STAG1Q8WVM7 1258 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
NEK9-210ENST00000557026 VPS37BQ9H9H4 285 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 PDIA3P30101 505 aaKnown RBP12.98□□□□□ -0.33
NEK9-210ENST00000557026 MIGA2Q7L4E1 593 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
NEK9-210ENST00000557026 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEK9-210ENST00000557026 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 RGL2O15211 777 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 BRD1O95696 1058 aa12.98□□□□□ -0.33
NEK9-210ENST00000557026 DLATP10515 647 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms