RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-245ENST00000556958 RAD50Q92878 1312 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 GPR179Q6PRD1 2367 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 FAM208BQ5VWN6 2430 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 TTC24A2A3L6 582 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-245ENST00000556958 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 C5orf67F2Z3F1 127 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 RAD21O60216 631 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 NR1I2O75469 434 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 CFHP08603 1231 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ARID4AP29374 1257 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-245ENST00000556958 BMPR1AP36894 532 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ATXN1P54253 815 aaKnown RBP6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ARHGAP8P85298 464 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ICA1Q05084 483 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 GPNMBQ14956 572 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ANGPT1Q15389 498 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 PTGISQ16647 500 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ZC3H14Q6PJT7 736 aaKnown RBP6.94□□□□□ -1.3
ATXN3-245ENST00000556958 PI16Q6UXB8 463 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 KIAA1211Q6ZU35 1233 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 CPXCR1Q8N123 301 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 EFHBQ8N7U6 833 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 PRPF38AQ8NAV1 312 aaKnown RBP6.94□□□□□ -1.3
ATXN3-245ENST00000556958 KREMEN2Q8NCW0 462 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 SLF1Q9BQI6 1058 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 GPCPD1Q9NPB8 672 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 FBXO28Q9NVF7 368 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 SORCS3Q9UPU3 1222 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 COG6Q9Y2V7 657 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 RIPK3Q9Y572 518 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 ZNF292O60281 2723 aa6.94□□□□□ -1.3
ATXN3-245ENST00000556958 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 LINC01565O15544 149 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 NBNO60934 754 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 LGR5O75473 907 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 ADRB1P08588 477 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 CYP7A1P22680 504 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 CTNNB1P35222 781 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 PLCD1P51178 756 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 DYNLL1P63167 89 aaKnown RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 EXOSC9Q06265 439 aaKnown RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 GABPAQ06546 454 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 RBL2Q08999 1139 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 DUSP28Q4G0W2 176 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 TMED8Q6PL24 325 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 SIAH1Q8IUQ4 282 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 FIBCD1Q8N539 461 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 CCER1Q8TC90 406 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 TOP1MTQ969P6 601 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 KIFC2Q96AC6 838 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 CCDC17Q96LX7 622 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 FGD4Q96M96 766 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 RTP3Q9BQQ7 232 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 RTKNQ9BST9 563 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 KANSL2Q9H9L4 492 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 VTA1Q9NP79 307 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 COPRSQ9NQ92 184 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 PDGFCQ9NRA1 345 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 IGSF5Q9NSI5 407 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 CLEC1BQ9P126 229 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 NXF1Q9UBU9 619 aaKnown RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 SWAP70Q9UH65 585 aa6.93□□□□□ -1.3
ATXN3-245ENST00000556958 FLNBO75369 2602 aaKnown RBP6.93□□□□□ -1.3
ATXN3-245ENST00000556958 FSD2A1L4K1 749 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 GRM6O15303 877 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 CKBP12277 381 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 GTF2F1P35269 517 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATXN3-245ENST00000556958 OAZ1P54368 228 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 CNTN2Q02246 1040 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 TFCP2Q12800 502 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 COL9A3Q14050 684 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-245ENST00000556958 FAM83BQ5T0W9 1011 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 TAPT1Q6NXT6 567 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 EEPD1Q7L9B9 569 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 ADGRA1Q86SQ6 560 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 SCUBE3Q8IX30 993 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 CCDC105Q8IYK2 499 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 FAM133AQ8N9E0 248 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 DTWD2Q8NBA8 298 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 IL17RAQ96F46 866 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
ATXN3-245ENST00000556958 WDR11Q9BZH6 1224 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 CDV3Q9UKY7 258 aaKnown RBP6.92□□□□□ -1.3
ATXN3-245ENST00000556958 NR2E1Q9Y466 385 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 EMSYQ7Z589 1322 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 A0A1B0GUL6 1792 aa6.92□□□□□ -1.3
ATXN3-245ENST00000556958 CEP250Q9BV73 2442 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 WDR87Q6ZQQ6 2873 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 NKRFO15226 690 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-245ENST00000556958 UPP2O95045 317 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 MMP1P03956 469 aa6.91□□□□□ -1.3
ATXN3-245ENST00000556958 UBTFL1P0CB47 393 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms