RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 ZCCHC4Q9H5U6 513 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 MBD1Q9UIS9 605 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-233ENST00000555816 IRAK3Q9Y616 596 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-233ENST00000555816 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 CLEC3AO75596 197 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 ARL4AP40617 200 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 NLRC3Q7RTR2 1065 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-233ENST00000555816 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-233ENST00000555816 HHIPL1Q96JK4 782 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 KCNC2Q96PR1 638 aa6.84□□□□□ -1.31
ATXN3-233ENST00000555816 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
ATXN3-233ENST00000555816 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 NFAT5O94916 1531 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-233ENST00000555816 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 N4BP3O15049 544 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 USP2O75604 605 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-233ENST00000555816 MPOP05164 745 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 SYPP08247 313 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 BMP7P18075 431 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 AMPHP49418 695 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
ATXN3-233ENST00000555816 ZNF165P49910 485 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 PRELPP51888 382 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 LCE5AQ5TCM9 118 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 TMC3Q7Z5M5 1100 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-233ENST00000555816 ATG4CQ96DT6 458 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 C20orf173Q96LM9 149 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 SGPP1Q9BX95 441 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 TERF2IPQ9NYB0 399 aa6.83□□□□□ -1.32
ATXN3-233ENST00000555816 NSD2O96028 1365 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 FADS2P1A8MWK0 482 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
ATXN3-233ENST00000555816 PRAMEF1O95521 474 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 BMP8BP34820 402 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 TGFB2P61812 414 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 FSTL1Q12841 308 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 INTS3Q68E01 1043 aaKnown RBP6.82□□□□□ -1.32
ATXN3-233ENST00000555816 OVOS1Q6IE37 1185 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 HS2ST1Q7LGA3 356 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 SIRT2Q8IXJ6 389 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 DHRS1Q96LJ7 313 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 CHST7Q9NS84 486 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
ATXN3-233ENST00000555816 MEIS3P2A8K0S8 358 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 SASH1O94885 1247 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 HOXC9P31274 260 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 VIPR1P32241 457 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 C16orf71Q8IYS4 520 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-233ENST00000555816 RAPGEF4Q8WZA2 1011 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 DACT3Q96B18 629 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-233ENST00000555816 COG3Q96JB2 828 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 NT5C1AQ9BXI3 368 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 PRDM14Q9GZV8 571 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 TAF6LQ9Y6J9 622 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
ATXN3-233ENST00000555816 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 UNCXA6NJT0 531 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 TNFRSF10CO14798 259 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 NME1P15531 152 aaKnown RBP6.8□□□□□ -1.32
ATXN3-233ENST00000555816 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
ATXN3-233ENST00000555816 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
ATXN3-233ENST00000555816 CNTD2Q9H8S5 307 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 GGT7Q9UJ14 662 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 PCDHB12Q9Y5F1 795 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
ATXN3-233ENST00000555816 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 IRS4O14654 1257 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 ZNF205O95201 554 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 BUD31P41223 144 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 HTRA3P83110 453 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 CAP1Q01518 475 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 APOBRQ0VD83 1088 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 SNW1Q13573 536 aaKnown RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 SSPNQ14714 243 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 ERICH6BQ5W0A0 696 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 SLITRK4Q8IW52 837 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 ACSL6Q9UKU0 697 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
ATXN3-233ENST00000555816 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
ATXN3-233ENST00000555816 KIAA1210Q9ULL0 1709 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms