RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PWP2Q15269 919 aaKnown RBP19.95■□□□□ 0.78
NEK9-204ENST00000554258 TRIM71Q2Q1W2 868 aaKnown RBP19.95■□□□□ 0.78
NEK9-204ENST00000554258 SLFN13Q68D06 897 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 CTR9Q6PD62 1173 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 FAM160B2Q86V87 743 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 GMCL1P1Q8NEA9 526 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 HDAC6Q9UBN7 1215 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 USP24Q9UPU5 2620 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 PDE4DQ08499 809 aa19.94■□□□□ 0.78
NEK9-204ENST00000554258 BAATQ14032 418 aaPredicted RBP19.94■□□□□ 0.78
NEK9-204ENST00000554258 STK11IPQ8N1F8 1099 aa19.94■□□□□ 0.78
NEK9-204ENST00000554258 MKL1Q969V6 931 aa19.94■□□□□ 0.78
NEK9-204ENST00000554258 RWDD3Q9Y3V2 267 aa19.94■□□□□ 0.78
NEK9-204ENST00000554258 MMP1P03956 469 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 SNAP25P60880 206 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 PLEKHG4Q58EX7 1191 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 KIAA2013Q8IYS2 634 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 EFHBQ8N7U6 833 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 AFG1LQ8WV93 481 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 KAT2BQ92831 832 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 WNT8BQ93098 351 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 IL17RAQ96F46 866 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 CCPG1Q9ULG6 757 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 SYNPO2Q9UMS6 1093 aa19.93■□□□□ 0.78
NEK9-204ENST00000554258 GOLIM4O00461 696 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 MMP3P08254 477 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 KCNG4Q8TDN1 519 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 STAG1Q8WVM7 1258 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 SEPT8Q92599 483 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 LRRCC1Q9C099 1032 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 BARX2Q9UMQ3 279 aaPredicted RBP19.92■□□□□ 0.78
NEK9-204ENST00000554258 SLC4A4Q9Y6R1 1079 aa19.92■□□□□ 0.78
NEK9-204ENST00000554258 ANKRD11Q6UB99 2663 aaPredicted RBP19.92■□□□□ 0.78
NEK9-204ENST00000554258 OTOGLQ3ZCN5 2332 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 IGKV6D-41A0A0C4DH26 115 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 RSPH10B2B2RC85 870 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 RSPH10BP0C881 870 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 CASTP20810 708 aaKnown RBP19.91■□□□□ 0.78
NEK9-204ENST00000554258 ST3GAL2Q16842 350 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 SLFNL1Q499Z3 407 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 ASTLQ6HA08 431 aaPredicted RBP19.91■□□□□ 0.78
NEK9-204ENST00000554258 AACSQ86V21 672 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 CEP95Q96GE4 821 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 DNAJC2Q99543 621 aaKnown RBP19.91■□□□□ 0.78
NEK9-204ENST00000554258 MPHOSPH6Q99547 160 aaKnown RBP19.91■□□□□ 0.78
NEK9-204ENST00000554258 ALG1Q9BT22 464 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 ARPP21Q9UBL0 812 aaPredicted RBP19.91■□□□□ 0.78
NEK9-204ENST00000554258 FAM208BQ5VWN6 2430 aa19.91■□□□□ 0.78
NEK9-204ENST00000554258 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
NEK9-204ENST00000554258 TTLL1O95922 423 aa19.9■□□□□ 0.78
NEK9-204ENST00000554258 ATF7P17544 494 aaPredicted RBP19.9■□□□□ 0.78
NEK9-204ENST00000554258 ADGRD2Q7Z7M1 963 aa19.9■□□□□ 0.78
NEK9-204ENST00000554258 CCDC136Q96JN2 1154 aa19.9■□□□□ 0.78
NEK9-204ENST00000554258 MTMR4Q9NYA4 1195 aa19.9■□□□□ 0.78
NEK9-204ENST00000554258 PCDHGC5Q9Y5F6 944 aa19.9■□□□□ 0.78
NEK9-204ENST00000554258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.89■□□□□ 0.77
NEK9-204ENST00000554258 ARIH2O95376 493 aa19.89■□□□□ 0.77
NEK9-204ENST00000554258 THPOP40225 353 aa19.89■□□□□ 0.77
NEK9-204ENST00000554258 SLC1A4P43007 532 aa19.89■□□□□ 0.77
NEK9-204ENST00000554258 NRIP1P48552 1158 aa19.89■□□□□ 0.77
NEK9-204ENST00000554258 NUCB1Q02818 461 aa19.89■□□□□ 0.77
NEK9-204ENST00000554258 KREMEN2Q8NCW0 462 aa19.89■□□□□ 0.77
NEK9-204ENST00000554258 MYH7P12883 1935 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 GLP2RO95838 553 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 LINC00271P0C7V0 271 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 CALML3P27482 149 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 PSEN2P49810 448 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 ZNF200P98182 395 aaPredicted RBP19.88■□□□□ 0.77
NEK9-204ENST00000554258 CAMK1Q14012 370 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 ANKRD45Q5TZF3 282 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 CENPQQ7L2Z9 268 aaPredicted RBP19.88■□□□□ 0.77
NEK9-204ENST00000554258 UBALD2Q8IYN6 164 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 CLASRPQ8N2M8 674 aaKnown RBP19.88■□□□□ 0.77
NEK9-204ENST00000554258 KATNAL1Q9BW62 490 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 IL1RAPL2Q9NP60 686 aa19.88■□□□□ 0.77
NEK9-204ENST00000554258 ADGRA3Q8IWK6 1321 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 SMARCA5O60264 1052 aaPredicted RBP19.87■□□□□ 0.77
NEK9-204ENST00000554258 ADD2P35612 726 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 MTMR3Q13615 1198 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 MFSD10Q14728 455 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 DGKDQ16760 1214 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 CHST3Q7LGC8 479 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 RBM23Q86U06 439 aaKnown RBP19.87■□□□□ 0.77
NEK9-204ENST00000554258 DHX37Q8IY37 1157 aaKnown RBP19.87■□□□□ 0.77
NEK9-204ENST00000554258 ZNF444Q8N0Y2 327 aaPredicted RBP19.87■□□□□ 0.77
NEK9-204ENST00000554258 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
NEK9-204ENST00000554258 MFSD1Q9H3U5 465 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 DLL3Q9NYJ7 618 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 PRR12Q9ULL5 1215 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 PLAGL2Q9UPG8 496 aa19.87■□□□□ 0.77
NEK9-204ENST00000554258 NFIBO00712 420 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 GH1P01241 217 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 LMNAP02545 664 aaKnown RBP19.86■□□□□ 0.77
NEK9-204ENST00000554258 ICAM1P05362 532 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 MCCP23508 829 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 KIAA0753Q2KHM9 967 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 SLC30A10Q6XR72 485 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 SUSD6Q92537 303 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms