RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 TBX21Q9UL17 535 aa23.36■■□□□ 1.33
FOXA1-203ENST00000553751 SPATA31C2B4DYI2 1134 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 FIBPO43427 364 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 GGPS1O95749 300 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 ITGB8P26012 769 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 CLK2P49760 499 aaKnown RBP23.35■■□□□ 1.33
FOXA1-203ENST00000553751 AK2P54819 239 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 AKAP17AQ02040 695 aaKnown RBP23.35■■□□□ 1.33
FOXA1-203ENST00000553751 CELF3Q5SZQ8 465 aaKnown RBP23.35■■□□□ 1.33
FOXA1-203ENST00000553751 MYSM1Q5VVJ2 828 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 DHX37Q8IY37 1157 aaKnown RBP23.35■■□□□ 1.33
FOXA1-203ENST00000553751 PGBD1Q96JS3 809 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 GLT8D2Q9H1C3 349 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 TMEM39AQ9NV64 488 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 TPCN1Q9ULQ1 816 aa23.35■■□□□ 1.33
FOXA1-203ENST00000553751 SORBS3O60504 671 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 CD4P01730 458 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 SCRN1Q12765 414 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 ANO3Q9BYT9 981 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 ZMYND12Q9H0C1 365 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 EHMT1Q9H9B1 1298 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 TMEM260Q9NX78 707 aa23.34■■□□□ 1.33
FOXA1-203ENST00000553751 A0A1W2PPC1 479 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 CPLX1O14810 134 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 FOSP01100 380 aaPredicted RBP23.33■■□□□ 1.33
FOXA1-203ENST00000553751 HOXD8P13378 290 aaPredicted RBP23.33■■□□□ 1.33
FOXA1-203ENST00000553751 ITGB5P18084 799 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 AP3B2Q13367 1082 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 ANKRD1Q15327 319 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 HSDL1Q3SXM5 330 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 CCDC12Q8WUD4 166 aaPredicted RBP23.33■■□□□ 1.33
FOXA1-203ENST00000553751 LBHD1Q9BQE6 289 aaPredicted RBP23.33■■□□□ 1.33
FOXA1-203ENST00000553751 BCAS3Q9H6U6 928 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 UBIAD1Q9Y5Z9 338 aa23.33■■□□□ 1.33
FOXA1-203ENST00000553751 MYH7BA7E2Y1 1941 aa23.33■■□□□ 1.32
FOXA1-203ENST00000553751 ADAMTS3O15072 1205 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 TLR3O15455 904 aaKnown RBP23.32■■□□□ 1.32
FOXA1-203ENST00000553751 PFKFB2O60825 505 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 SSRP1Q08945 709 aaKnown RBP23.32■■□□□ 1.32
FOXA1-203ENST00000553751 DGKDQ16760 1214 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 NBPF20Q3BBV1 942 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 NLRX1Q86UT6 975 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 TRIM22Q8IYM9 498 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 KAT2BQ92831 832 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 BADQ92934 168 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 GPRASP2Q96D09 838 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 SPATA33Q96N06 139 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 UBE2OQ9C0C9 1292 aaKnown RBP23.32■■□□□ 1.32
FOXA1-203ENST00000553751 SLKQ9H2G2 1235 aaPredicted RBP23.32■■□□□ 1.32
FOXA1-203ENST00000553751 LAMA3Q16787 3333 aa23.32■■□□□ 1.32
FOXA1-203ENST00000553751 B4GALT4O60513 344 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 NEK4P51957 841 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 NEDD9Q14511 834 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 CCDC148Q8NFR7 591 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 TRPV6Q9H1D0 765 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 C6orf50Q9HD87 102 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 VPS54Q9P1Q0 977 aa23.31■■□□□ 1.32
FOXA1-203ENST00000553751 ZNF286BP0CG31 522 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 RAG1P15918 1043 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 SREBF1P36956 1147 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 JAKMIP3Q5VZ66 844 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 NFRKBQ6P4R8 1299 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 CPLX2Q6PUV4 134 aaKnown RBP23.3■■□□□ 1.32
FOXA1-203ENST00000553751 METTL7BQ6UX53 244 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 PPP1R13LQ8WUF5 828 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 SENP7Q9BQF6 1050 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 MLXIPQ9HAP2 919 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 SH3GLB2Q9NR46 395 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 DOCK5Q9H7D0 1870 aa23.3■■□□□ 1.32
FOXA1-203ENST00000553751 DEXIO95424 95 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 F2P00734 622 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 GNA11P29992 359 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 MTMR1Q13613 665 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 CYFIP1Q7L576 1253 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 REXO1Q8N1G1 1221 aaKnown RBP23.29■■□□□ 1.32
FOXA1-203ENST00000553751 CDHR1Q96JP9 859 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 JADE2Q9NQC1 790 aa23.29■■□□□ 1.32
FOXA1-203ENST00000553751 TRMT13Q9NUP7 481 aaKnown RBP23.29■■□□□ 1.32
FOXA1-203ENST00000553751 PPFIA4O75335 1185 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 CDKL5O76039 1030 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 LARGE1O95461 756 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 TIMP1P01033 207 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 KCNA2P16389 499 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 FAM47CQ5HY64 1035 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 TDHQ8IZJ6 230 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 CRYGNQ8WXF5 182 aa23.28■■□□□ 1.32
FOXA1-203ENST00000553751 ATP9AO75110 1047 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 FXR1P51114 621 aaKnown RBP eCLIP23.27■■□□□ 1.32
FOXA1-203ENST00000553751 PTPN11Q06124 597 aaPredicted RBP23.27■■□□□ 1.32
FOXA1-203ENST00000553751 ME3Q16798 604 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 CYP2W1Q8TAV3 490 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 AIFM3Q96NN9 605 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 KIF2CQ99661 725 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 GPR20Q99678 358 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 MXRA8Q9BRK3 442 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 TELO2Q9Y4R8 837 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 STK36Q9NRP7 1315 aa23.27■■□□□ 1.32
FOXA1-203ENST00000553751 HAS3O00219 553 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 NOP56O00567 594 aaKnown RBP23.26■■□□□ 1.31
FOXA1-203ENST00000553751 CTDNEP1O95476 244 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms